Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0147
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    35   0.38 
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    32   2.7  

>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 34.7 bits (76), Expect = 0.38
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 101 ILMNTYIIICSV-VIHIYFNVYICNYISVQICMYWFM 208
           I + TY+ +C    IH+Y  VYI  YI + IC+Y +M
Sbjct: 165 IFIYTYVCMCVCSCIHVYTCVYIHIYIGMHICVYSYM 201


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +2

Query: 62  YSCI---IPLDNSINR-ILMNTYIIICSVVIHIYFNVYICNYISVQICMYWFM 208
           Y+C+   I +   I+R I + TY+ IC V IHIY  +++C Y  + +  Y ++
Sbjct: 181 YTCMHMCIHMYTCIHRCIFIYTYVYIC-VYIHIYICIHVCVYSYIHMYTYVYI 232


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 68  CIIPLDNSINRILMNTYIIICSVVIHIYFNVYICNYISVQICMYWFM 208
           C+    +    +   T++ IC V I+I  +VYI  YI + IC+Y ++
Sbjct: 155 CVFTCTHVYISVFTCTHVYIC-VFIYICIHVYIHIYICIHICVYSYI 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,004,941
Number of Sequences: 237096
Number of extensions: 2150781
Number of successful extensions: 2821
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2797
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)