Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0147
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    33   0.44 
AY069621-1|AAL39766.1|  595|Drosophila melanogaster LD39177p pro...    33   0.44 
AE014298-911|AAF46175.2|  615|Drosophila melanogaster CG14444-PA...    33   0.44 

>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +2

Query: 74  IPLDNSINRILMNTYI-IICSVVIHIYFNVYICNYISVQICMY 199
           I L  S   I ++ Y+ I  S+ + IY ++Y+C Y+S+ + +Y
Sbjct: 12  ISLGGSFIGIYLSIYLSIYLSIYLSIYLSIYLCIYLSISLSIY 54


>AY069621-1|AAL39766.1|  595|Drosophila melanogaster LD39177p
           protein.
          Length = 595

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 44  LYDHSIYSCIIPLDNSINRILMN-TYIIICSVVIHIYFNVYICNY 175
           LYDH +Y C+IP  + +  +L N  Y+    V   +   +   NY
Sbjct: 22  LYDHKLYECVIPAADLLRTVLKNDRYVATLDVEYQVLLYLLNANY 66


>AE014298-911|AAF46175.2|  615|Drosophila melanogaster CG14444-PA,
           isoform A protein.
          Length = 615

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 44  LYDHSIYSCIIPLDNSINRILMN-TYIIICSVVIHIYFNVYICNY 175
           LYDH +Y C+IP  + +  +L N  Y+    V   +   +   NY
Sbjct: 22  LYDHKLYECVIPAADLLRTVLKNDRYVATLDVEYQVLLYLLNANY 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,385,272
Number of Sequences: 53049
Number of extensions: 681797
Number of successful extensions: 1127
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)