Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0147
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division c...    29   5.0  
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    29   5.0  
AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14 phosph...    29   5.0  
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    29   5.0  
AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein phosp...    29   5.0  

>U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division
           cycle related protein14, isoform c protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 732 AQKPICSHNIQTTSAHYVKCTGMHGNAKPL 643
           ++ P+  HN  TT  +     G++G+ KPL
Sbjct: 630 SRAPLSPHNYSTTQGYSTSSRGLYGDKKPL 659


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 732 AQKPICSHNIQTTSAHYVKCTGMHGNAKPL 643
           ++ P+  HN  TT  +     G++G+ KPL
Sbjct: 630 SRAPLSPHNYSTTQGYSTSSRGLYGDKKPL 659


>AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14
           phosphatase isoform C protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 732 AQKPICSHNIQTTSAHYVKCTGMHGNAKPL 643
           ++ P+  HN  TT  +     G++G+ KPL
Sbjct: 630 SRAPLSPHNYSTTQGYSTSSRGLYGDKKPL 659


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 732 AQKPICSHNIQTTSAHYVKCTGMHGNAKPL 643
           ++ P+  HN  TT  +     G++G+ KPL
Sbjct: 630 SRAPLSPHNYSTTQGYSTSSRGLYGDKKPL 659


>AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein
           phosphatase CDC14 protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 732 AQKPICSHNIQTTSAHYVKCTGMHGNAKPL 643
           ++ P+  HN  TT  +     G++G+ KPL
Sbjct: 630 SRAPLSPHNYSTTQGYSTSSRGLYGDKKPL 659


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,883
Number of Sequences: 27780
Number of extensions: 376891
Number of successful extensions: 851
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)