Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0145
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.44 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 111 LRFSCAFHFFNFHV 70
           L F CAF FFN H+
Sbjct: 180 LLFCCAFIFFNMHL 193


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 243 SYHIDNYPCSLTCRLLTHETG 181
           S + D YP   TCRL+  + G
Sbjct: 49  SRNTDTYPTLETCRLVCGKYG 69



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 340 KGPFCPMGGSEVY 378
           KG    MGG EVY
Sbjct: 370 KGEIFHMGGDEVY 382


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 359  IGQKGPLVPSS 327
            I Q GPL PSS
Sbjct: 968  ISQDGPLAPSS 978


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 359  IGQKGPLVPSS 327
            I Q GPL PSS
Sbjct: 968  ISQDGPLAPSS 978


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 201 VCT*GCRDSCRYDKK*ENGP 260
           V T G   SC +D   E GP
Sbjct: 240 VATLGTTSSCTFDNLEELGP 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.134    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,976
Number of Sequences: 336
Number of extensions: 1893
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)