Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0145
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 117 2e-27
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 103 6e-23
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 40 8e-04
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 40 8e-04
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 39 0.001
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.001
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 38 0.002
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 38 0.002
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 38 0.002
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 37 0.004
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 37 0.004
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 36 0.007
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 36 0.010
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 36 0.010
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 36 0.010
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 36 0.013
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 36 0.013
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 36 0.013
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 35 0.022
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 35 0.022
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.029
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.029
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 34 0.029
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 34 0.039
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 34 0.039
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 34 0.039
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 34 0.039
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 34 0.039
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 34 0.039
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 34 0.039
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.051
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 33 0.090
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 32 0.12
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 32 0.12
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 32 0.16
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.21
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 0.21
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.21
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 31 0.21
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 31 0.21
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 31 0.21
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.21
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 31 0.21
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 31 0.21
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 31 0.27
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 30 0.48
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 30 0.48
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 30 0.48
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 30 0.48
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 30 0.63
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 29 1.1
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 1.1
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 1.5
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 28 1.9
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 28 1.9
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 3.4
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 3.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 27 3.4
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 27 3.4
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z66565-10|CAB76415.1| 281|Caenorhabditis elegans Hypothetical p... 27 4.5
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 27 4.5
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 27 4.5
AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical ... 27 4.5
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC087081-10|AAK66035.1| 326|Caenorhabditis elegans Hypothetical... 26 7.8
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 117 bits (282), Expect = 2e-27
Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Frame = +1
Query: 79 IEEVKSTAKT-QRISAHSHIKGLGLD-ENGVPIQMAAGLVGQESAREAAGIVVDMIRSKK 252
IEEVK T K +RI+AHSH+KGLG+D E AAG VGQ AR AA IVVDMIR K
Sbjct: 20 IEEVKPTPKQIKRIAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAASIVVDMIRLKC 79
Query: 253 MARRALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEVY 378
MA RA+L+AGPP TGKTAIALA++QELG PF P+ SEV+
Sbjct: 80 MAGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASEVF 121
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 103 bits (246), Expect = 6e-23
Identities = 50/97 (51%), Positives = 68/97 (70%)
Frame = +1
Query: 88 VKSTAKTQRISAHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMARRA 267
VK K +R S HSHI GLGL++ ++ G+VGQ +AR+AAG++V MI+ K+A RA
Sbjct: 9 VKDIVKVERTSVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAAGLIVKMIQEGKIAGRA 68
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEVY 378
LL+ G PG GKTAIA+AI++ELG PF + SE+Y
Sbjct: 69 LLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIY 105
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 39.5 bits (88), Expect = 8e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE 330
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 39.5 bits (88), Expect = 8e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE 330
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 39.5 bits (88), Expect = 8e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE 330
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGT 339
R +LL GPPGTGKT IA A+A E G+
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGS 270
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
R +L GPPG GKT +A AIA E
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANE 540
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
R +LL GPPGTGKT IA A+A E G
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETG 268
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
R +L GPPG GKT +A AIA E
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE 539
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
R +LL GPPGTGKT IA A+A E G
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETG 268
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
R +L GPPG GKT +A AIA E
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE 539
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 148 LDENGVPIQMAAGLVGQESAREAAGIVV----DMIRSKKMARRALLLAGPPGTGKTAIAL 315
LD GV + AG ++A E A I+ ++ + + + +LL GPPG GKT +A
Sbjct: 170 LDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLRQPVKGILLFGPPGNGKTLLAK 229
Query: 316 AIAQE 330
A+A E
Sbjct: 230 AVAGE 234
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSE 372
R LL GPPG GKT +A A+A E + PF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSE 372
R LL GPPG GKT +A A+A E + PF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSE 372
+ +LL GPPGTGKT +A AIA E + PF GSE
Sbjct: 235 KGVLLVGPPGTGKTLLARAIAGE--AQVPFFHTAGSE 269
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKGPFCPMGG 366
L GPPG GKT+IA AIA+ +G K +GG
Sbjct: 332 LCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGG 364
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 181 AGLVG-QESAREAAGIVV---DMIRSKKMARRALLLAGPPGTGKTAIALAIAQELG 336
AGL G +E+ +EA + + + + + +LL GPPGTGK+ IA A+A E G
Sbjct: 121 AGLEGAKEALKEAVILPIKFPQLFTGNRKPWQGILLFGPPGTGKSYIAKAVATEAG 176
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 36.3 bits (80), Expect = 0.007
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSE 372
+ +L GPPGTGKT +A A A E PF + GSE
Sbjct: 327 KGAILTGPPGTGKTLLAKATAGEANV--PFITVSGSE 361
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 35.9 bits (79), Expect = 0.010
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 229
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.010
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 189 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 224
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 35.9 bits (79), Expect = 0.010
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 245
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 35.5 bits (78), Expect = 0.013
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTK 342
R +LL GPPGTGKT++ +AQ L +
Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIR 199
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 35.5 bits (78), Expect = 0.013
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 226 VVDMIRSKKMARRA--LLLAGPPGTGKTAIALAIAQELGTKGPF 351
VV M++ R LL GPPGTGKT+ ALA ++L K F
Sbjct: 35 VVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIF 78
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 35.5 bits (78), Expect = 0.013
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ +L+ GPPGTGKT +A A+A + TK F + G ++
Sbjct: 212 KGVLMYGPPGTGKTMMARAVAAQ--TKSTFLKLAGPQL 247
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 34.7 bits (76), Expect = 0.022
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+ +LL GPPG GKT +A A+A E G
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG 593
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
R ++ GPPG GKT A A+A EL
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGEL 263
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 34.7 bits (76), Expect = 0.022
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+ +LL GPPG GKT +A A+A E G
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG 593
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
R ++ GPPG GKT A A+A EL
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGEL 263
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 34.3 bits (75), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 265 RGILLFGPPGTGKTLMARQIGKMLNAREP 293
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.039
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTK 342
R +LL GPPG GKT +A A+A+ G +
Sbjct: 115 RGILLYGPPGCGKTLLAKAVARAAGCR 141
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.039
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTK 342
R +LL GPPG GKT +A A+A+ G +
Sbjct: 118 RGILLYGPPGCGKTLLAKAVARAAGCR 144
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.039
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
+ LL GPPGTGKT +A A+A +L
Sbjct: 177 KGCLLFGPPGTGKTLLARAVASQL 200
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 33.9 bits (74), Expect = 0.039
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
+ LL GPPGTGKT +A A+A +L
Sbjct: 185 KGCLLFGPPGTGKTLLARAVASQL 208
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.039
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE-----LGTKGP 348
I ++ S+ + R ++L G PG GKT IA A+A E L KGP
Sbjct: 481 IRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGP 527
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.039
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE-----LGTKGP 348
I ++ S+ + R ++L G PG GKT IA A+A E L KGP
Sbjct: 481 IRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGP 527
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.039
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQE-----LGTKGP 348
I ++ S+ + R ++L G PG GKT IA A+A E L KGP
Sbjct: 481 IRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGP 527
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.051
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 223 IVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQEL 333
I V+++R K + + L GPPG GKT+IA +IA L
Sbjct: 494 IAVNLLR-KSIGGKILCFHGPPGVGKTSIAKSIATAL 529
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.090
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ +LL GPPGTGKT A A+A T F + GSE+
Sbjct: 212 KGVLLYGPPGTGKTLCARAVANR--TDACFIRVIGSEL 247
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG------TKGPFCPMG 363
R ++ GPPGTGKT A ++AQ G T G P+G
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDIAPLG 382
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSE 372
R +L+ GPPG GKT +A A+A T F + GSE
Sbjct: 196 RGVLMYGPPGCGKTMLAKAVA--ANTAASFIRVVGSE 230
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 181 AGLVGQESAREAAGIVV-------DMIRSKKMARRALLLAGPPGTGKTAIALAIAQE 330
A + G E A++A +V D+ + + +LL GPPGTGKT I +A +
Sbjct: 316 ADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ 372
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 426 KGVVFYGPPGTGKTLVARALANE 448
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 424 KGVVFYGPPGTGKTLVARALANE 446
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 426 KGVVFYGPPGTGKTLVARALANE 448
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 426 KGVVFYGPPGTGKTLVARALANE 448
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 424 KGVVFYGPPGTGKTLVARALANE 446
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 426 KGVVFYGPPGTGKTLVARALANE 448
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 259 RRALLLAGPPGTGKTAIALAIAQELG 336
RR L GPPGTGK++ A+A G
Sbjct: 197 RRGYLFYGPPGTGKSSFISALASHFG 222
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 259 RRALLLAGPPGTGKTAIALAIAQELG 336
RR L GPPGTGK++ A+A G
Sbjct: 243 RRGYLFYGPPGTGKSSFISALASHFG 268
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQEL 333
LL GPPGTGKT LA A+++
Sbjct: 65 LLFYGPPGTGKTTTVLAAARQM 86
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQE 330
+ ++ GPPGTGKT +A A+A E
Sbjct: 426 KGVVFYGPPGTGKTLVARALANE 448
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 205 AREAAGIVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQEL 333
+RE + ++I K+ A+ ++G PGTGKTA A+ +
Sbjct: 274 SREIEKFIREVIDPKRGESSAMYISGVPGTGKTATVRAVVNSM 316
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
+ ++L G PGTGKT +A A+A + T F + GSE+
Sbjct: 223 KGVILYGCPGTGKTLLAKAVANQ--TSATFLRIVGSEL 258
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 31.1 bits (67), Expect = 0.27
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 172 QMAAGLVGQESAREAAGIVVDMIRSKKMARRALLLAGPPGTGKTAIALAIAQELG 336
Q L+ +E + +D + ++ + + LLL+GP G GK+ +A +A++ G
Sbjct: 301 QKVDDLLASLGEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAG 355
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 30.7 bits (66), Expect = 0.36
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 256 ARRALLLAGPPGTGKTAIALAIAQELGTKGPFCPMGGSEV 375
A + ++L G PGTGKT +A A+A T F GS++
Sbjct: 216 APKGVILYGEPGTGKTLLAKAVAN--STSATFIRATGSDL 253
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+A LL+G PG GKT A Q+LG
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLG 365
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 253 MARRALLLAGPPGTGKTAIALAIAQELGTK 342
+ R L+ GPPGTGKT ++ I L K
Sbjct: 458 LTRPLSLIQGPPGTGKTVVSATIVYHLVQK 487
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 30.3 bits (65), Expect = 0.48
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQEL 333
++L+GPPG GKT A+A+EL
Sbjct: 46 IVLSGPPGCGKTTSVWALAREL 67
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 253 MARRALLLAGPPGTGKTAIALAIAQELGTK 342
+ R L+ GPPGTGKT ++ I L K
Sbjct: 458 LTRPLSLIQGPPGTGKTVVSATIVYHLVQK 487
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 29.9 bits (64), Expect = 0.63
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 190 VGQESAREAAGIVVDMIRSKKMARRALLLAGPPGTGKTAI 309
V E A+ + +++D + K A R L L GP G+GK+ I
Sbjct: 1041 VSFEYAQRSDKMILDGVSLKLPAGRTLALVGPSGSGKSTI 1080
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 259 RRALLLAGPPGTGKTAIALAIAQELG 336
R +L+ G PGTGK+ + +A++LG
Sbjct: 9 RPNILVTGSPGTGKSTLGQQVAEKLG 34
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTK----GPFCPMGGSEV 375
L+L GP G GKTA+ A+A++ + GP GSE+
Sbjct: 819 LVLIGPSGVGKTALFRALAKQENMRIISIGPETGRSGSEI 858
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 265 ALLLAGPPGTGKTAIALAIAQELGTKGPFC 354
++ ++G PGTGKTA + + + LG C
Sbjct: 197 SIYVSGQPGTGKTATTMRVLKSLGKSVRSC 226
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
protein ZK1067.2 protein.
Length = 2219
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 271 LLAGPPGTGKTAIALAIAQEL 333
L+ GPPGTGKT I + I + +
Sbjct: 827 LIQGPPGTGKTHIGVQIVKTI 847
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 271 LLAGPPGTGKTAIALAIAQEL 333
++ GPPGTGKT +A+ I +
Sbjct: 824 MVVGPPGTGKTDVAVQIISNI 844
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALA 318
+ L+L GPPG+GKT LA
Sbjct: 2531 KPLVLCGPPGSGKTMTLLA 2549
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALA 318
+ L+L GPPG+GKT LA
Sbjct: 2531 KPLVLCGPPGSGKTMTLLA 2549
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+ +LL G PG GK++ +A+AQ G
Sbjct: 1350 KPILLEGAPGCGKSSTVMALAQLTG 1374
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELG 336
LLL G G GKT++ A+A +G
Sbjct: 382 LLLVGETGVGKTSVVQAVADLIG 404
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 241 RSKKMARRALLLAGPPGTGKTAI 309
R+KK RR ++L G PG G+ I
Sbjct: 337 RNKKKRRRVVVLLGAPGVGRNEI 359
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 232 DMIRSKKMARRALLLAGPPGTGKTAIALAIA 324
DM KK+A+ +L+ GPP GKT + +A
Sbjct: 21 DMQEDKKVAK--ILVLGPPKAGKTTLCTFLA 49
>Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.7 protein.
Length = 333
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 156 FIQPQAFYMTVSRDPLRFSCAFHFFNFHV 70
F+ P FY+ + R P +F F +FH+
Sbjct: 26 FLYPLIFYLVLCRTPKQFGNLKWFLSFHI 54
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 241 RSKKMARRALLLAGPPGTGKTAIALAIAQELGTKGPFC 354
+S ++ + +LL GP G GKT + +A+ L C
Sbjct: 135 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALC 172
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 241 RSKKMARRALLLAGPPGTGKTAIALAIAQELGTKGPFC 354
+S ++ + +LL GP G GKT + +A+ L C
Sbjct: 251 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALC 288
>Z66565-10|CAB76415.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 VPIQMAAGLVGQESAREAAGIVVDMIRSKKMARRALL-LAGPPGTGKTAIALAIAQELGT 339
+PIQ+ + + A AAG + +++A RAL A T AI L Q L +
Sbjct: 195 LPIQLQRAMAAEAEAARAAGAKIIAAEGEQLASRALADAADVIATSPCAIQLRYLQTLNS 254
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 247 KKMARRALLLAGPPGTGKTAIALAIAQE 330
+KM R ++L+GP G GK+ I QE
Sbjct: 9 RKMPCRPIVLSGPSGGGKSTILTRAMQE 36
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 247 KKMARRALLLAGPPGTGKTAIALAIAQE 330
+KM R ++L+GP G GK+ I QE
Sbjct: 20 RKMPCRPIVLSGPSGGGKSTILTRAMQE 47
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 256 ARRALLLAGPPGTGKTAIA-LAIAQELG 336
++ LLL P G GKT +A L + QE+G
Sbjct: 489 SKEHLLLCAPTGAGKTNVALLTMLQEIG 516
>AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 VPIQMAAGLVGQESAREAAGIVVDMIRSKKMARRALL-LAGPPGTGKTAIALAIAQELGT 339
+PIQ+ + + A AAG + +++A RAL A T AI L Q L +
Sbjct: 195 LPIQLQRAMAAEAEAARAAGAKIIAAEGEQLASRALADAADVIATSPCAIQLRYLQTLNS 254
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 226 VVDMIRSKKMARRALLLAGPPGTGKTAI 309
V+D + K A + L + GP G+GK+ I
Sbjct: 1019 VLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 226 VVDMIRSKKMARRALLLAGPPGTGKTAI 309
V+D + K A + L + GP G+GK+ I
Sbjct: 1019 VLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 241 RSKKMARRALLLAGPPGTGKTAIALAIAQ 327
+SK + LLL+G P +GKT A AI++
Sbjct: 466 KSKDQKMQWLLLSGAPDSGKTTWARAISR 494
>AC087081-10|AAK66035.1| 326|Caenorhabditis elegans Hypothetical
protein Y82E9BL.8 protein.
Length = 326
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 237 HIDNYPCSLTCRLLTH---ETGCHLNRNTIFIQPQAFYMTVSRDPLRFS 100
HID PC CR L + E G H + ++ Q + + + +S
Sbjct: 55 HIDRLPCRKVCRNLRYAVDELGLHFKEIELRLRSQEIILNLDNHQVGYS 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,725,452
Number of Sequences: 27780
Number of extensions: 178068
Number of successful extensions: 607
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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