Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0145
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   0.90 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.8  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   2.8  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   4.8  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   4.8  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   4.8  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   4.8  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   6.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 233 STTIPAASRADS*PTRPAAI 174
           +TT+PAAS   + P  P+A+
Sbjct: 225 TTTLPAASATGTGPATPSAV 244



 Score = 20.2 bits (40), Expect = 8.4
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 160 GVPIQMAAGLVGQESAREAAGIVVDMIRSKKMARRALLLAGPP 288
           GVP+  A G     +  E    + D+   K   RRA ++ G P
Sbjct: 578 GVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIP 620


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 119 EILCVLAVLFTSSIFMLKAALLF 51
           EILC +AVLF +  + L +   F
Sbjct: 6   EILCGIAVLFLALYYYLTSTFDF 28


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 301 FCQYQEALPRVKLAGPFSYFLSYRQLSLQPHVQTLDPR 188
           F   QE +PR++  GP + F  +   +      +L+PR
Sbjct: 365 FVSIQEQIPRLRYIGPPTSFPRFIPPNAYRFRPSLNPR 402


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 301 FCQYQEALPRVKLAGPFSYFLSYRQLSLQPHVQTLDPR 188
           F   QE +PR +  GP + F  +   +      +L+PR
Sbjct: 365 FVSIQEQIPRFRYIGPPTSFPRFIPPNAYRFRPSLNPR 402


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 301 FCQYQEALPRVKLAGPFSYFLSYRQLSLQPHVQTLDPR 188
           F   QE +PR +  GP + F  +   +      +L+PR
Sbjct: 365 FVSIQEQIPRFRYIGPPTSFPRFIPPNAYRFRPSLNPR 402


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 301 FCQYQEALPRVKLAGPFSYFLSYRQLSLQPHVQTLDPR 188
           F   QE +PR +  GP + F  +   +      +L+PR
Sbjct: 365 FVSIQEQIPRFRYIGPPTSFPRFIPPNAYRFRPSLNPR 402


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 301 FCQYQEALPRVKLAGPFSYFLSYRQLSLQPHVQTLDPR 188
           F   QE +PR +  GP + F  +   +      +L+PR
Sbjct: 354 FVSIQEQIPRFRYIGPPTSFPRFIPPNAYRFRPSLNPR 391


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 237 HIDNYPCSLTCRL 199
           ++ NY C +TC L
Sbjct: 71  YLTNYSCFITCAL 83


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 249 LTSYHIDNYPCSL 211
           +TSYH  N  CSL
Sbjct: 74  ITSYHRINLKCSL 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,080
Number of Sequences: 438
Number of extensions: 2180
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)