Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0137
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    43   0.006
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    38   0.22 
UniRef50_Q6AP01 Cluster: Putative uncharacterized protein; n=1; ...    37   0.51 

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = -3

Query: 248 MGDGNHSPSREPYARLPTRAMTKNVLILGFI 156
           MGDGNHSPS  PYA LPTRA  K   +  F+
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTSLFIFV 31


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 37.9 bits (84), Expect = 0.22
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -2

Query: 297  LAVEQRLGSAPGIAEVHGRR 238
            L+  QRLGSAPGIAEVHGRR
Sbjct: 967  LSGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q6AP01 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 116

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +2

Query: 389 CTFSNSIRHILIHCN----RSLALQKHGDKTDPYSRYPISLPQKHMTINPLNDKSAYHY- 553
           C   +++RH+  HC     R  + +K  +K D   +  I L    +T     DK  Y   
Sbjct: 7   CDERSNLRHLGRHCQCSSGRMTSFEKRREKMDNPFKCSICLKTAKITTPRATDKIQYKIE 66

Query: 554 A*TVSVYNVSTNCKEKKFTR 613
             T   Y VST C+EK FT+
Sbjct: 67  CPTCGCYFVSTTCREKFFTK 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,895,672
Number of Sequences: 1657284
Number of extensions: 12050289
Number of successful extensions: 21532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21526
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)