Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0137
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0105 + 756998-757225,757311-758597                               29   2.5  
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036...    28   7.7  

>08_01_0105 + 756998-757225,757311-758597
          Length = 504

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = -1

Query: 640 FRKTDPGLGAR------ELFFFTIRRYVVYADGLGIMVC*FIVQWIDCH-VFLWE*NWI 485
           FR+ DP   AR      ++F F  R    Y+D L   VC F   +   H   LW  +W+
Sbjct: 196 FRRADPAYSARLLHAATQVFDFADRHRGSYSDSLASSVCPFYCSYSGYHDELLWGASWL 254


>07_03_1387 +
           26202975-26203274,26203363-26203449,26203541-26203648,
           26203708-26203980,26205242-26205355,26205900-26206268
          Length = 416

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 233 GYRRPWTSAMPGAEPSRCSTA 295
           G  RPWT+A  G    RCS A
Sbjct: 17  GGHRPWTAASRGVSARRCSVA 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,583,356
Number of Sequences: 37544
Number of extensions: 313923
Number of successful extensions: 559
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)