Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0137
         (670 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g68530.1 68414.m07828 very-long-chain fatty acid condensing e...    28   4.9  

>At1g68530.1 68414.m07828 very-long-chain fatty acid condensing
           enzyme (CUT1) identical to very-long-chain fatty acid
           condensing enzyme (CUT1) GB:AF129511 (required for
           cuticular wax biosynthesis and pollen fertility:
           Millar,A.A., et al., Plant Cell (1999))
          Length = 497

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 428 CNRSLALQKHGDKTDPYSRYPISLPQ 505
           CNR++   K G  +D   RYP+ +P+
Sbjct: 468 CNRTIKTPKDGPWSDCIDRYPVFIPE 493


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,822,991
Number of Sequences: 28952
Number of extensions: 269929
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)