Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0136
         (484 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036...    29   2.0  
10_08_0055 - 14505747-14506934                                         27   7.9  

>07_03_1387 +
           26202975-26203274,26203363-26203449,26203541-26203648,
           26203708-26203980,26205242-26205355,26205900-26206268
          Length = 416

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 231 ASGYRRPWTSAMPGAEPSRCSTA 299
           A G  RPWT+A  G    RCS A
Sbjct: 15  ARGGHRPWTAASRGVSARRCSVA 37


>10_08_0055 - 14505747-14506934
          Length = 395

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 484 CKDRFCRHVSGEPV 443
           C+DR C+H+ GE V
Sbjct: 312 CEDRLCKHIDGESV 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,638,616
Number of Sequences: 37544
Number of extensions: 199393
Number of successful extensions: 362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)