Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0134
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0559 + 18516732-18516746,18516893-18517330 36 0.033
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 32 0.40
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 31 0.93
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 30 1.6
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 30 1.6
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 2.2
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 2.8
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 2.8
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 3.8
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 3.8
01_01_0932 - 7363147-7363478,7364336-7364423,7364515-7364604,736... 29 3.8
07_03_0046 + 12781335-12782073,12782254-12783014 29 5.0
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 28 6.6
08_02_1167 + 24847689-24848156 28 6.6
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 28 6.6
01_05_0017 - 17199365-17199757,17200040-17200156 28 6.6
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 8.7
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 35.9 bits (79), Expect = 0.033
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = +2
Query: 275 DEVPAIP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVE-- 445
+E PA P EA ++ AP ++++A K +E AE ++ K E
Sbjct: 35 EETPAAPAEAVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVA 94
Query: 446 -EPAA--QPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPQ 574
EPAA + E + E A VAE KEE+ P+ E + AA + +
Sbjct: 95 PEPAAAAEAEAKEAEPAAQVAEEVKEEEAAPAPAAEEVKVEEAAPVAE 142
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 398 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISKEEKPSATDAE 541
+E P AEA S + K EEP AA E +K E +A A ++E KP+ + E
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKPAEPEPE 216
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 31.1 bits (67), Expect = 0.93
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = +2
Query: 284 PAIPEAKK--------DDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIK 439
P IPE+K+ + +P++ DI +S +P++ + + DIK
Sbjct: 1272 PQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIK 1331
Query: 440 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPQHGE 583
E+P+ P EV + ++I E D E S+ +I + E
Sbjct: 1332 CEDPSPTPISKSKEV-SPQSKILSESYLDNQDVERECPSSILITESKE 1378
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +3
Query: 432 ILKWKNQLLSLKIQKLKYKLPSLKFQKKK----NLVLLMQKVLLTQLPSFPNMVKKIDLA 599
+L+ + +L SLKI L SL + NL+LL L LP FP+ ++K+D+
Sbjct: 1165 LLQNRGKLQSLKIYSAS-SLESLPLHMRDLCSLNLLLLSGARKLQSLPDFPSSLQKLDIT 1223
Query: 600 PTVKSDAAAVPEIKTPE 650
K V ++PE
Sbjct: 1224 CCCKELEEKVGVYESPE 1240
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 419 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPQHG 580
A+ D E+ E+ + EVQ V E +P DAEG+A A ++ + G
Sbjct: 255 AQDGDDVEEQKGEGEEEMEEEVQVEVQEKRGRGRPRKADAEGNALQARVLRELG 308
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 389 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAA 562
AK ++E ++ D++ +E A + E+ + E +A E E+K DAE G+A+ A
Sbjct: 63 AKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDE--GEDKSDEMDAEAGAAEEEA 119
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +2
Query: 416 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEKPSAT 532
E++S DIK + +AQP +K E VQAT++ + K EEK T
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCT 436
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +2
Query: 389 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 562
A ++E P AEA++ E AA E+ KTE T E +KEE+P A A + + A
Sbjct: 133 APAAEEPKAEAEA-----EAEAAATEEPKTEEPKT-EEPAKEEEPKAAAAAAAEEPKA 184
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 446 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEG 544
EP A PE + + Q + +K+ PSA D +G
Sbjct: 132 EPPAPPEPKQQQQQQQAGDAAKQAAPSADDEDG 164
>02_01_0201 -
1347868-1347925,1348040-1348135,1348447-1348523,
1349385-1349453,1349576-1349629,1350295-1350350,
1350487-1350694,1350978-1351066,1351163-1351187
Length = 243
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 489 ACTSVFESSG*AAGSSTLISADFASASGISDDF 391
+CT +F+SS +A + ++A FA AS D+F
Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96
>01_01_0932 -
7363147-7363478,7364336-7364423,7364515-7364604,
7364709-7364813
Length = 204
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 446 EPAAQPEDSKTEVQATVAEISKEEK-----PSATDAEGSADSAAIIPQHGEEDR 592
EP A+ T + V E KEE+ P+A AE +A S ++ + EE++
Sbjct: 137 EPEAEAAAETTSREVAVEEEKKEEEAAPAEPAAAAAEAAAPSTEVVEEKKEEEK 190
>07_03_0046 + 12781335-12782073,12782254-12783014
Length = 499
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 398 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAAIIPQ 574
S+ P EA + K+EEP S+ A++ + E+PS D E + D AAI+ +
Sbjct: 175 SDEPQTEASVS--KIEEPLTIEPLSEPSTFASLIDEKVPEQPSVEDEEIQTPDHAAILFR 232
Query: 575 HGEEDRLGS 601
G ++ G+
Sbjct: 233 DGFDEDYGN 241
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 410 DAEAKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADS 556
+++ S D ++ A +P D +TE++ TV ++ E + G D+
Sbjct: 32 ESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDN 81
>08_02_1167 + 24847689-24848156
Length = 155
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 389 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 490
AK E P+AEA++A VEE AA P + E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 597 APTVKSDAAAVPEIKTPEAADAPKLADNP--VNEDKP 701
AP + S AVP P A D P LAD P NED+P
Sbjct: 108 APPI-SQCTAVPT--PPPAPDTPTLADEPAETNEDEP 141
>01_05_0017 - 17199365-17199757,17200040-17200156
Length = 169
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 410 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAAIIPQHGEE 586
+ ++K++ K+EEP S+ A+ E E+PS + E + D AAI+ + G E
Sbjct: 110 EPQSKASVYKIEEPLTIEPHSEPSCSASSIEEKVPEQPSVENEEIQTLDRAAILFRDGFE 169
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 410 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 559
D + K++ +K EE + SKTE A + KEEK A D+ +A++A
Sbjct: 1268 DPDFKNSYLKKEE-STDDASSKTEETTNNASLQKEEK--ANDSSKNAENA 1314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,233,963
Number of Sequences: 37544
Number of extensions: 225696
Number of successful extensions: 847
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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