Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0134
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 37 0.019
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.72
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 0.72
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 1.7
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.7
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.2
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 2.2
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 29 2.9
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 2.9
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.1
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17) 28 8.9
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 28 8.9
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 28 8.9
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 401 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 541
E P EA+S D KVE P + E + EV+ATV E+ + +A E
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE 68
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 410 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 571
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 392 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 571
K++ +P+A +A + E AQPE K E + + + + T A+ A A P
Sbjct: 393 KATALPEAPKATAQPEAPEATAQPEAPKATALPEAPEATAQPEATETTAQPKAQKATAQP 452
Query: 572 QHGE 583
+ E
Sbjct: 453 EAPE 456
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 395 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATD-AEGSAD 553
++E+P +A ++ + E PAA+PE + E +A V + + EE + + AE D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEEPEALNEKAEDPKD 640
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 413 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSA 559
A + A++ +EE Q ED++ V+ A + K E P T+A D A
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEA 1221
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +2
Query: 440 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADS 556
+E PA ED KT+ +AT AE+ +E KP+A D + SA S
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASS 1166
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 392 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 556
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 392 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 571
+ S + +AEA EE A+PE T E S E KP A+ E +A A P
Sbjct: 492 RKSPVSEAEAPKPSAAKEE--AEPEQMDTSEPEPAKEPSSEIKPEASKPE-TAKPEATSP 548
Query: 572 QHGE 583
GE
Sbjct: 549 TDGE 552
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 407 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 562
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 398 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 550
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 585 KIDLAPTVKSDAAAVPEIKTPEAADAPKLADNPVNEDKPC 704
K + P K DA PE KT + ADAP AD K C
Sbjct: 309 KSEEKPKAKRDA---PETKTEKVADAPTAADKKEKSAKRC 345
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 522 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 391
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 392 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 562
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 563 II 568
+
Sbjct: 1085 SV 1086
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 392 KSSEIPDAEAKSADIKVEEPAAQ--PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI 565
++SE + + D + P A PE+ K + + T E KEE P DA ++
Sbjct: 196 EASEEEEGKPSLEDGTEDTPEANKTPEEPKEDEKVTEEETPKEETPKVEDAPEEVEAPKE 255
Query: 566 IPQHGEED 589
EED
Sbjct: 256 EESPKEED 263
>SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17)
Length = 735
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +3
Query: 471 QKLKYKLPSLKFQKKKNLVLLMQKVLLTQLPSFPNMVKKIDLAP 602
+++ +KLP + QK + L Q ++ P + ++ ++L+P
Sbjct: 176 RRVSFKLPQIILQKAPEITLSEQTIVEASRPLYQTKLRSLNLSP 219
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 413 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPQHGEEDR 592
+E KS D ++P +PED + E E+KP + D P+ ED+
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPEDKLEDK 84
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 422 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPQHGEEDR 592
K D ++P +PED + E E+KP + E D+ P++ ED+
Sbjct: 52 KPEDKTEDKPEDKPEDKPEDKPEDKPEDKLEDKPEDSSEEKPEDNPEDKPEYKPEDK 108
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 443 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPQHGEED 589
++P +PED + Q E +E+KP A + D P+ ED
Sbjct: 101 DKPEDKPEDKPEDKQEDKPEDKQEDKPEAKPEDKPEDEPEEKPEDQPED 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,251,226
Number of Sequences: 59808
Number of extensions: 257136
Number of successful extensions: 1331
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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