Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0133
         (389 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   9e-06
UniRef50_Q7QTA7 Cluster: GLP_15_20389_19814; n=1; Giardia lambli...    33   2.6  
UniRef50_A3Q9N7 Cluster: Putative outer membrane adhesin like pr...    31   7.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.8 bits (116), Expect = 9e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 374 FLLLRWVNELTAHLVLSGYWSP 309
           FLLLRWV+ELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q7QTA7 Cluster: GLP_15_20389_19814; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_15_20389_19814 - Giardia lamblia
           ATCC 50803
          Length = 191

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = -2

Query: 265 HPSNRNAL-LLHGRKRRGDGTHPRG---LTRGATISNYVNYNFSGLIFIARCYSFTVEVN 98
           H S+R AL LLH  +   D  H RG     RG   +    ++F+ +I+   CY+  + + 
Sbjct: 5   HTSDRRALQLLHVSQMTLDPPHSRGPQEQQRGLARA----WHFNLVIYSLLCYTSHIALT 60

Query: 97  REHLLSTYFIRSIGTRLRDSNTGASL 20
             H+L    +RSIG   R     A++
Sbjct: 61  TPHILLAACLRSIGEATRGPTACATM 86


>UniRef50_A3Q9N7 Cluster: Putative outer membrane adhesin like
            proteiin; n=1; Shewanella loihica PV-4|Rep: Putative
            outer membrane adhesin like proteiin - Shewanella loihica
            (strain BAA-1088 / PV-4)
          Length = 4836

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 125  SCNKNQTRKIIIYVITDGSTSCESTRVGTITPPLSAVKQ*CVSV 256
            + N N    +I YV+TDGS++  ST   T+TP  + V    ++V
Sbjct: 3102 AANYNGPVPVITYVLTDGSSTDTSTLTITVTPDNTDVANDAITV 3145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,382,177
Number of Sequences: 1657284
Number of extensions: 8113882
Number of successful extensions: 17869
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17866
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)