BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0132 (631 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M32637-1|AAA28511.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31 M31902-1|AAA28509.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31 M31900-1|AAA28510.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31 AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p pro... 133 2e-31 AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA ... 133 2e-31 AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-P... 38 0.008 BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p pro... 34 0.18 AL031766-3|CAA21133.1| 167|Drosophila melanogaster EG:84H4.2,FB... 34 0.18 AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA ... 34 0.18 L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-hel... 33 0.32 X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein. 33 0.42 AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p pro... 33 0.42 AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic helix-... 33 0.42 AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA... 33 0.42 AY071350-1|AAL48972.1| 198|Drosophila melanogaster RE38860p pro... 31 1.3 AE013599-2352|AAF57948.2| 246|Drosophila melanogaster CG5550-PA... 31 1.3 AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA... 30 3.0 BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro... 28 9.1 AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 28 9.1 AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 28 9.1 AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 28 9.1 >M32637-1|AAA28511.1| 199|Drosophila melanogaster protein ( D.melanogaster extramacrochaetaeprotein gene, exon 2. ). Length = 199 Score = 133 bits (322), Expect = 2e-31 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%) Frame = +3 Query: 66 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 227 MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++ Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60 Query: 228 KLEVIQHVIDYICDLQSALENHPAVGQFDA 317 KLE+IQHVIDYICDLQ+ LE HP +G FDA Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90 >M31902-1|AAA28509.1| 199|Drosophila melanogaster protein ( D.melanogaster extramacrochaetae(emc) protein mRNA, complete cds. ). Length = 199 Score = 133 bits (322), Expect = 2e-31 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%) Frame = +3 Query: 66 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 227 MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++ Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60 Query: 228 KLEVIQHVIDYICDLQSALENHPAVGQFDA 317 KLE+IQHVIDYICDLQ+ LE HP +G FDA Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90 >M31900-1|AAA28510.1| 199|Drosophila melanogaster protein ( D.melanogaster extramacrochaetae(emc) protein gene, exon 2. ). Length = 199 Score = 133 bits (322), Expect = 2e-31 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%) Frame = +3 Query: 66 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 227 MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++ Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60 Query: 228 KLEVIQHVIDYICDLQSALENHPAVGQFDA 317 KLE+IQHVIDYICDLQ+ LE HP +G FDA Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90 >AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p protein. Length = 199 Score = 133 bits (322), Expect = 2e-31 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%) Frame = +3 Query: 66 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 227 MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++ Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60 Query: 228 KLEVIQHVIDYICDLQSALENHPAVGQFDA 317 KLE+IQHVIDYICDLQ+ LE HP +G FDA Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90 >AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA protein. Length = 199 Score = 133 bits (322), Expect = 2e-31 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%) Frame = +3 Query: 66 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 227 MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++ Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60 Query: 228 KLEVIQHVIDYICDLQSALENHPAVGQFDA 317 KLE+IQHVIDYICDLQ+ LE HP +G FDA Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90 >AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-PA protein. Length = 150 Score = 38.3 bits (85), Expect = 0.008 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = +3 Query: 183 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 287 L++L+P P NRK+SK+E+I+ YI L S LE Sbjct: 84 LRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLE 118 >BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p protein. Length = 167 Score = 33.9 bits (74), Expect = 0.18 Identities = 14/37 (37%), Positives = 26/37 (70%) Frame = +3 Query: 177 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 287 ++L+ L+P +P ++K+SK+E+++ I YI L LE Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165 >AL031766-3|CAA21133.1| 167|Drosophila melanogaster EG:84H4.2,FBgn0011277;HLH4C protein. Length = 167 Score = 33.9 bits (74), Expect = 0.18 Identities = 14/37 (37%), Positives = 26/37 (70%) Frame = +3 Query: 177 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 287 ++L+ L+P +P ++K+SK+E+++ I YI L LE Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165 >AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA protein. Length = 167 Score = 33.9 bits (74), Expect = 0.18 Identities = 14/37 (37%), Positives = 26/37 (70%) Frame = +3 Query: 177 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 287 ++L+ L+P +P ++K+SK+E+++ I YI L LE Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165 >L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-helix protein protein. Length = 162 Score = 33.1 bits (72), Expect = 0.32 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +3 Query: 141 RDGENAE-IQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 287 R+G E + + ++ L+P +P ++K+SK+E+++ I YI L LE Sbjct: 111 REGIRVEAFNVSFADVRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 160 >X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein. Length = 398 Score = 32.7 bits (71), Expect = 0.42 Identities = 13/39 (33%), Positives = 26/39 (66%) Frame = +3 Query: 174 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 290 L KL+ +P +P+ K++K+E+++ +YI L+ LE+ Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212 >AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p protein. Length = 398 Score = 32.7 bits (71), Expect = 0.42 Identities = 13/39 (33%), Positives = 26/39 (66%) Frame = +3 Query: 174 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 290 L KL+ +P +P+ K++K+E+++ +YI L+ LE+ Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212 >AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic helix-loop-helix neuraltranscription factor BIPAROUS protein. Length = 398 Score = 32.7 bits (71), Expect = 0.42 Identities = 13/39 (33%), Positives = 26/39 (66%) Frame = +3 Query: 174 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 290 L KL+ +P +P+ K++K+E+++ +YI L+ LE+ Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212 >AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA protein. Length = 398 Score = 32.7 bits (71), Expect = 0.42 Identities = 13/39 (33%), Positives = 26/39 (66%) Frame = +3 Query: 174 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 290 L KL+ +P +P+ K++K+E+++ +YI L+ LE+ Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212 >AY071350-1|AAL48972.1| 198|Drosophila melanogaster RE38860p protein. Length = 198 Score = 31.1 bits (67), Expect = 1.3 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +3 Query: 66 MKAIT-AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVI 242 MK I A+C + +AS + GEN +IQ Y PK + K++V Sbjct: 1 MKPICFALCVFSLGLFYLASAEI-----GENVKIQTYKKYSSSCKELNPKKSGVQKIQVG 55 Query: 243 QHVIDYICDLQSA 281 VI+ CD+ A Sbjct: 56 SDVIEVYCDVTIA 68 >AE013599-2352|AAF57948.2| 246|Drosophila melanogaster CG5550-PA protein. Length = 246 Score = 31.1 bits (67), Expect = 1.3 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +3 Query: 66 MKAIT-AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVI 242 MK I A+C + +AS + GEN +IQ Y PK + K++V Sbjct: 1 MKPICFALCVFSLGLFYLASAEI-----GENVKIQTYKKYSSSCKELNPKKSGVQKIQVG 55 Query: 243 QHVIDYICDLQSA 281 VI+ CD+ A Sbjct: 56 SDVIEVYCDVTIA 68 >AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA protein. Length = 327 Score = 29.9 bits (64), Expect = 3.0 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 329 SVATLRSVAAAPPSEETARPSPYAQHHPP-QITLHTRTQKSNGTRKTKPT 475 +VA L S +APP E P + PP ++ L KSNG++ + T Sbjct: 30 TVAPLTSSTSAPPKMEVKPTKPMIVNAPPKKVQLTEAAPKSNGSKPLQVT 79 >BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p protein. Length = 2851 Score = 28.3 bits (60), Expect = 9.1 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +3 Query: 132 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHPAVGQ 308 QR D E +Q + L+PF + ++ + + + D+ Q ALEN P + Q Sbjct: 1412 QRLLDAEEMHLQQHQQTPLSLLPFTDEQQQQLHHQALSNASDFQQHQQLALENDPELKQ 1470 >AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin repeat singleKH domain protein protein. Length = 4001 Score = 28.3 bits (60), Expect = 9.1 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +3 Query: 132 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHPAVGQ 308 QR D E +Q + L+PF + ++ + + + D+ Q ALEN P + Q Sbjct: 1976 QRLLDAEEMHLQQHQQTPLSLLPFTDEQQQQLHHQALSNASDFQQHQQLALENDPELKQ 2034 >AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB, isoform B protein. Length = 4001 Score = 28.3 bits (60), Expect = 9.1 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +3 Query: 132 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHPAVGQ 308 QR D E +Q + L+PF + ++ + + + D+ Q ALEN P + Q Sbjct: 1976 QRLLDAEEMHLQQHQQTPLSLLPFTDEQQQQLHHQALSNASDFQQHQQLALENDPELKQ 2034 >AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA, isoform A protein. Length = 4001 Score = 28.3 bits (60), Expect = 9.1 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +3 Query: 132 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHPAVGQ 308 QR D E +Q + L+PF + ++ + + + D+ Q ALEN P + Q Sbjct: 1976 QRLLDAEEMHLQQHQQTPLSLLPFTDEQQQQLHHQALSNASDFQQHQQLALENDPELKQ 2034 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,187,044 Number of Sequences: 53049 Number of extensions: 522472 Number of successful extensions: 2034 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1882 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2022 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2621070450 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -