Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0130
(545 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 180 3e-44
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 168 8e-41
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 156 4e-37
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 155 6e-37
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 153 3e-36
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 151 8e-36
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 101 1e-20
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 100 2e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 3e-19
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 93 5e-18
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 87 2e-16
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 84 2e-15
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 81 1e-14
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 78 2e-13
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 75 8e-13
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 74 2e-12
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 59 8e-08
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 9e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.007
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.050
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 1.1
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.4
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 34 1.9
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.9
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.5
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 33 4.3
UniRef50_Q03LS6 Cluster: Possible cell surface protein; n=1; Str... 32 9.9
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 32 9.9
UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8; Chlorobi... 32 9.9
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 32 9.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 180 bits (437), Expect = 3e-44
Identities = 84/95 (88%), Positives = 91/95 (95%), Gaps = 1/95 (1%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLP 323
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLP
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLP 95
Score = 72.9 bits (171), Expect = 4e-12
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
PSRQFG++VLTTS GIMDHEEAR+KH GGKILGFFF
Sbjct: 95 PSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 168 bits (408), Expect = 8e-41
Identities = 80/95 (84%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLP 323
IVVNLTGRLNKCGVIS RFDV + D+++W NLLP
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLP 218
Score = 66.5 bits (155), Expect = 4e-10
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P RQFG++VLTT GI+DHEEAR+KH GGKILGFFF
Sbjct: 218 PLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 156 bits (378), Expect = 4e-37
Identities = 74/97 (76%), Positives = 83/97 (85%), Gaps = 1/97 (1%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 215
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 216 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLP 323
GK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLP 193
Score = 60.1 bits (139), Expect = 3e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFF 424
P+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 193 PARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 155 bits (376), Expect = 6e-37
Identities = 73/95 (76%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLP 323
IVV L GRLNKCGVISPRFDV + +IE WT LLP
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLP 95
Score = 69.3 bits (162), Expect = 5e-11
Identities = 28/36 (77%), Positives = 35/36 (97%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
PSRQFG++VLTTS GIMDHEEAR+K++GGK+LGFF+
Sbjct: 95 PSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 153 bits (371), Expect = 3e-36
Identities = 73/95 (76%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLP 323
+VV LT RLNKCGVISPRF V + D+E+W NLLP
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLP 94
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
PS QFG+++LTTS GI D EEAR+KH GGKILGFFF
Sbjct: 94 PSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 151 bits (367), Expect = 8e-36
Identities = 71/86 (82%), Positives = 78/86 (90%)
Frame = +3
Query: 63 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 242
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 243 RLNKCGVISPRFDVPINDIERWTNLL 320
RLNKCGVI+ RFDV D+E+W N L
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNL 259
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGK 409
PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 261 PSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 101 bits (242), Expect = 1e-20
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIER 305
I+V L GR+NKCG ISPR+ + N + R
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLR 88
Score = 35.9 bits (79), Expect = 0.61
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
PS++ G ++++T G+M H + ++ +GG LG+ +
Sbjct: 98 PSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 100 bits (240), Expect = 2e-20
Identities = 46/89 (51%), Positives = 63/89 (70%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW 308
V L GR+NK G I PRF V +++ E+W
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKW 89
Score = 41.1 bits (92), Expect = 0.016
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+ +FG L+++TS G+M H+EA +K +GG+++ + +
Sbjct: 95 PAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 3e-19
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 174 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 266
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 57.2 bits (132), Expect(2) = 3e-19
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 173
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 92.7 bits (220), Expect = 5e-18
Identities = 44/89 (49%), Positives = 56/89 (62%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW 308
V L GR+NKCG I PR+ V ERW
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERW 89
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P++ FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 95 PAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 87.4 bits (207), Expect = 2e-16
Identities = 39/85 (45%), Positives = 59/85 (69%)
Frame = +3
Query: 57 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 236
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 237 TGRLNKCGVISPRFDVPINDIERWT 311
GR+N C ++ R DV +IE++T
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYT 89
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/36 (61%), Positives = 33/36 (91%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+RQ+GY+V+TT GI+DHEEA K+++GG++LGFF+
Sbjct: 94 PTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 83.8 bits (198), Expect = 2e-15
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 239
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 240 GRLNKCGVISPRFDVPINDIERW-TNLLP 323
GRLN+CG ISP + V + IE + T LLP
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLP 93
Score = 50.8 bits (116), Expect = 2e-05
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 93 PARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 81.4 bits (192), Expect = 1e-14
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +3
Query: 51 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 230
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 231 NLTGRLNKCGVISPRFDVPINDIERW 308
L+G +N CG I PRF + + E +
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMY 88
Score = 41.9 bits (94), Expect = 0.009
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+R FG L+++T+ G+M ++ARK+ LGG +L + +
Sbjct: 94 PARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 239
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 240 GRLNKCGVISPRFDVPINDIERW 308
+N CGVI PR V ++IER+
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERY 88
Score = 45.6 bits (103), Expect = 8e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P++ FG ++LTT+ GIM H EARK +GGK+L + +
Sbjct: 94 PAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 75.4 bits (177), Expect = 8e-13
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 222 IVVNLTGRLNKCGVISPRFDVPINDIERW 308
V+L ++ KCG ISPRF V + W
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFW 89
Score = 38.7 bits (86), Expect = 0.087
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
PS G LV+TT+ G+M H EA ++ +GG ++G+ +
Sbjct: 95 PSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 215
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 216 GKIVVNLTGRLNKCGVISPRFDVPINDIERW 308
GK V L G +N+CG + PR+ ++ E+W
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKW 106
Score = 44.0 bits (99), Expect = 0.002
Identities = 15/36 (41%), Positives = 28/36 (77%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+R +G L++TTS G+M H EAR++ +GG+++ + +
Sbjct: 112 PARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 58.8 bits (136), Expect = 8e-08
Identities = 24/85 (28%), Positives = 48/85 (56%)
Frame = +3
Query: 54 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 233
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 234 LTGRLNKCGVISPRFDVPINDIERW 308
L+ N+ I PRF V +++E++
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKY 88
Score = 35.1 bits (77), Expect = 1.1
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = +2
Query: 320 PSRQFGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
P+ FG L+L+TS G++ + EA+++ +GG ++ + +
Sbjct: 94 PALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 9e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +3
Query: 150 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 305
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 198 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 299
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.050
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 180 IGEFEIVDDHRAGKIVVNLTGRLNK 254
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 1.1
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 54 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 197
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.4
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 191
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 SHQRY*KMD*SAPSRQ-FGYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
SH+ Y K+ +R G +L+T G+M EAR+K LGG+++G F
Sbjct: 94 SHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARKKHLGGKIL 415
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 4.3
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -3
Query: 117 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 1
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 4.3
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 45 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 215
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 33.1 bits (72), Expect = 4.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARKKHLGGKIL 415
G +++TS GIM EARK+ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_Q03LS6 Cluster: Possible cell surface protein; n=1;
Streptococcus thermophilus LMD-9|Rep: Possible cell
surface protein - Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9)
Length = 996
Score = 31.9 bits (69), Expect = 9.9
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPHDSLV 338
VM +G IG + D H I TG R+ + + ++WTNL P D
Sbjct: 448 VMSPYGEIGASYVKDFHDGVVITYTQTGSDGTMSASIARYGIVL---KKWTNLKPSDPTE 504
Query: 339 T*SLQQ-VVASWTMKKP 386
T S + VV S+ +K P
Sbjct: 505 TYSDDRFVVGSYGIKNP 521
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 31.9 bits (69), Expect = 9.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARKKHLGGKILGFFF 427
G ++L+TS G+M +EAR+ +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_P59031 Cluster: 30S ribosomal protein S8; n=8;
Chlorobiaceae|Rep: 30S ribosomal protein S8 - Chlorobium
tepidum
Length = 131
Score = 31.9 bits (69), Expect = 9.9
Identities = 12/27 (44%), Positives = 22/27 (81%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARKKHLGGKIL 415
G +L+TS GI+ +EAR++++GG++L
Sbjct: 101 GLFILSTSKGILTDKEAREQNVGGEVL 127
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 31.9 bits (69), Expect = 9.9
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 222 IVVNLTGRLNKCGVIS 269
+ + L N VI+
Sbjct: 60 LRIFLKYGANNERVIT 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,628,512
Number of Sequences: 1657284
Number of extensions: 9486967
Number of successful extensions: 19428
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 19087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19427
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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