Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0129
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 64 6e-11
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 58 2e-09
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 48 4e-06
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 32 0.17
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 30 0.91
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 30 0.91
05_04_0051 + 17511696-17512526 29 1.2
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 29 1.2
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 28 2.8
05_06_0251 + 26687833-26688120,26689288-26689365,26690499-266905... 28 2.8
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 28 2.8
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 28 2.8
02_05_0271 + 27342468-27343577 28 2.8
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 28 2.8
08_01_0044 + 301981-302826,302972-303580 28 3.7
01_06_1749 - 39636951-39638102 28 3.7
11_06_0149 - 20636801-20637044,20637859-20639180 27 4.9
05_03_0446 + 14111667-14111906,14112011-14112418 27 4.9
09_06_0297 - 22112619-22112912,22113469-22113630,22113734-22113739 27 6.4
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 27 6.4
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 27 8.5
02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852 27 8.5
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 27 8.5
02_02_0262 - 8396755-8397244,8398659-8398705 27 8.5
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 27 8.5
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 63.7 bits (148), Expect = 6e-11
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = -3
Query: 278 RADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVG 99
R D + VL + + + +PN EDPLN EAA L+ N +LFE +V+RAM GGYVG
Sbjct: 128 REDWKPVLN-INTVIYGLNLLFTQPNDEDPLNHEAAAVLRDNPKLFEANVKRAMAGGYVG 186
Query: 98 TSYFERC 78
YF RC
Sbjct: 187 QHYFPRC 193
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = -3
Query: 278 RADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVG 99
R D + VL V + + +PN EDPLN EAA L+ N FE++VQRAM GGYVG
Sbjct: 420 REDWKPVLN-VNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFERNVQRAMAGGYVG 478
Query: 98 TSYFER 81
++F R
Sbjct: 479 ETHFPR 484
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 47.6 bits (108), Expect = 4e-06
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = -3
Query: 278 RADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVG 99
R D + VL + + + +PN EDPLN +AA L+ + + F ++VQ AM GGYV
Sbjct: 117 REDWKPVLN-INTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQTAMSGGYVD 175
Query: 98 TSYFERCL 75
+F R L
Sbjct: 176 RVHFPRFL 183
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 206 PNPEDPLNKEAADELQSNRRLFEQHVQ 126
PNP DPLN EAA + +R +EQ V+
Sbjct: 126 PNPSDPLNGEAAALMMRDRPAYEQKVK 152
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 29.9 bits (64), Expect = 0.91
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 180 GSSGRAPKQQATFRTTRSESYARRLRRHILFRTMPQMKTC 61
G++ R+ ++ TF R + + RRLR + P+M+ C
Sbjct: 610 GAAERSDRRAMTFLRPRQQDFKRRLRSRMRHMQQPKMELC 649
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 29.9 bits (64), Expect = 0.91
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -3
Query: 344 HPSNRNAL-LLHGRNRQGGGTHPRADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAAD 168
+P R + +LH G ++ + V+++ + PN E P N EAA
Sbjct: 86 YPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAK 145
Query: 167 ELQSNRRLFEQHVQRAMR 114
+ + R F++ V+R +R
Sbjct: 146 DWREKRDDFKKKVRRIVR 163
>05_04_0051 + 17511696-17512526
Length = 276
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -3
Query: 302 RQGGGTHPRADSQEVL--PPVKNMYWNCXXXX*EPNPEDPLNKEAADEL 162
R GGG H + + PP +Y + P P DP++ +DE+
Sbjct: 94 RHGGGHHTTPGPSDPIGHPPSDEIYGHGGGHHTAPGPSDPIDPPPSDEI 142
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 293 GGTHPRADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAADEL 162
GGT P S + PP +Y + P P DP+ +DE+
Sbjct: 75 GGTVP-GPSDPLGPPSDEIYRHGGGHHTTPGPSDPIGHPPSDEI 117
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 206 PNPEDPLNKEAADELQSNRRLFEQHVQRAMR 114
PN E P N EAA E + R F++ V+R +R
Sbjct: 133 PNDESPANIEAAKEWREKRDDFKKKVRRLVR 163
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 209 EPNPEDPLNKEAADELQSNRRLFEQHVQ 126
+PNP P N EAA N+R + + V+
Sbjct: 139 DPNPNSPANSEAARLFSENKREYNRKVR 166
>05_06_0251 +
26687833-26688120,26689288-26689365,26690499-26690580,
26691155-26691195,26691973-26692143,26693586-26693813,
26694237-26694638
Length = 429
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 202 TLKIPSTRKQRTSSKATGDFSNNTFRELCEAATSAHL-ISN--DASNENL 62
TL+ R+++ S K TGD N + C+ + HL I N D S E++
Sbjct: 108 TLERYEVREKKVSKKETGDPMKNPTSDSCQNCNACHLQICNYGDVSTESI 157
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 209 EPNPEDPLNKEAADELQSNRRLFEQHVQ 126
+PNP P N EAA N+R + + V+
Sbjct: 90 DPNPNSPANSEAARLFSENKREYNRKVR 117
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 209 EPNPEDPLNKEAADELQSNRRLFEQHVQ 126
+PNP P N EAA N+R + + V+
Sbjct: 115 DPNPNSPANSEAARLFSENKREYNRKVR 142
>02_05_0271 + 27342468-27343577
Length = 369
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 269 SLRGGGYHRPAYFGREAVMRFGLKGGAAVELLLETLERISRGGARYPIRP 418
+L+ G+H + ++RFG GG A+ LE L S A P+ P
Sbjct: 15 TLQDHGHHHHHHGASPDLLRFGGSGGGAMAARLEHLLSSSSASAFRPLPP 64
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 84 FEIRCADVAASHSSLNVLFEKSPVALELVRCFLVEGIFRVWFLKK 218
F+ D+A S SSL V F K + + R ++ EGI+ F+KK
Sbjct: 292 FDDADVDMAVSLSSLAVFFNKGEICVAGSRVYVQEGIYDE-FVKK 335
>08_01_0044 + 301981-302826,302972-303580
Length = 484
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 398 PPLEIYVLRSQVIVQRLPHPSNRNALLLHGRN 303
PPL + V+ +V LPH S R+ HGR+
Sbjct: 17 PPLRLPVIGHMHLVGSLPHVSLRDLAAKHGRD 48
>01_06_1749 - 39636951-39638102
Length = 383
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 369 SSNSSTAAPPFKPKRITA 316
SS +S AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181
>11_06_0149 - 20636801-20637044,20637859-20639180
Length = 521
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 290 GTHPRADSQEVLPPVKNMYW 231
G HP AD EV PV M W
Sbjct: 370 GVHPSADGAEVTSPVSIMEW 389
>05_03_0446 + 14111667-14111906,14112011-14112418
Length = 215
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 60 CRFSFEASFEIRCADVAASHSS 125
CR+ E S+ RC DV AS S+
Sbjct: 146 CRYDVEGSYAARCLDVFASASA 167
>09_06_0297 - 22112619-22112912,22113469-22113630,22113734-22113739
Length = 153
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -2
Query: 399 APPRDIRSKVSSNSSTAAPP-----FKPKRITASRPK 304
APP + +S++ + STAAPP F P R + S P+
Sbjct: 117 APPTEKKSRLLPSISTAAPPSSSRIFLPSRRSQSPPR 153
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 209 EPNPEDPLNKEAADELQSNRRLFEQ 135
+PNP+DPL E A +S R +E+
Sbjct: 112 DPNPDDPLVPEIAHVYKSQRPRYEE 136
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 426 LTIGRIGYRAPPRDIRSKVSSNSSTAAPPFKPKRITASRPK 304
+T GR+ R P ++R + SS+ APP P+RI RP+
Sbjct: 286 VTSGRV--RRPCLNMRPRSPRRSSSPAPPPSPRRI-LRRPR 323
>02_05_1177 + 34739359-34740304,34740401-34740568,34740672-34741852
Length = 764
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 63 RFSFEASFEIRCADVAASHSSLNVLFEKSPVALELVRCFLVEGIFRVWFLKKKKTIP 233
R + + F++ C D A+ L + FE+ P +LV L +G RV + K P
Sbjct: 55 RCARDEGFQLNCDDSASPPRLLTLQFEQHP---QLVSLSLADGEARVLLKPESKCYP 108
>02_05_0889 -
32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = -3
Query: 341 PSNRNALLLHGRNRQGGGTHPRADSQEVLPPVKNMYWNCXXXX*EPNPEDPLNKEAAD 168
PS+ L G ++ G+ +D ++ +PP ++ EP +DP ++ +D
Sbjct: 19 PSSNLDLFPSGGGKRRSGSETDSDDEDSIPPDWRSLYHPRLEVAEPAVKDPRDEATSD 76
>02_02_0262 - 8396755-8397244,8398659-8398705
Length = 178
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -2
Query: 399 APPRDIRSKVSSNSSTAAPP 340
+PPR++ +K ++ + TAAPP
Sbjct: 151 SPPREVAAKEATAAETAAPP 170
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 209 EPNPEDPLNKEAADELQSNRRLFE 138
+PNP+D L E + E + NR++F+
Sbjct: 126 DPNPDDGLMAEISREYKYNRQVFD 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,370,570
Number of Sequences: 37544
Number of extensions: 278593
Number of successful extensions: 841
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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