Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0128
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_17593| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 29 2.4
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 3.2
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3) 29 3.2
SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 29 4.2
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 29 4.2
SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9) 28 5.6
SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8) 28 5.6
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 28 5.6
SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 28 7.4
SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2) 28 7.4
SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9) 28 7.4
SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035) 28 7.4
SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.8
SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079) 27 9.8
SB_30266| Best HMM Match : Fzo_mitofusin (HMM E-Value=1.2) 27 9.8
>SB_18297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 148 KAKQNGRRLQNVDRRVSSHHQRETERISHQMVRRGHNLHPLG--VCRRHRQG*FLPQRVD 321
+ K +G R+++ + RV SH R +++ G+ + G V + RV
Sbjct: 41 RVKSHGNRVKSHENRVKSHENRVKSH-GNRVKSHGNRVKSHGNRVKSHENRVKSHGNRVK 99
Query: 322 SHQNLRPEFEQRVEARPVRIKEHPKK 399
SH+N E RV++ R+K H +
Sbjct: 100 SHENRVKSHENRVKSHENRVKSHENR 125
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 148 KAKQNGRRLQNVDRRVSSHHQRETERISHQMVRRGHNLHPLGVCRRHRQG*FLPQRVDSH 327
+ K +G R+++ RV SH R SH+ + H R + RV SH
Sbjct: 62 RVKSHGNRVKSHGNRVKSHGNRVK---SHENRVKSHGNRVKSHENRVKSH---ENRVKSH 115
Query: 328 QNLRPEFEQRVEARPVRIKEH 390
+N E RV++ R+K H
Sbjct: 116 ENRVKSHENRVKSHGNRVKSH 136
>SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
N+ES H + K+IP N+++RL T S++ +N+ + Y+K L E
Sbjct: 73 NRESNHPPTITKNIPVNINKRLSTLSSDKETFNQAAPPYQKALDE 117
>SB_17593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 606 GNHISIRLPKQMTSWTPSTYENNNFGHLSNGSLALFEARNFDSSG 472
GN + ++ P+ S TPS N+ GH N ++ +RN SSG
Sbjct: 127 GNDLDVKFPQSRYSRTPSPIPGNSSGHSKNTTI---RSRNGVSSG 168
>SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F S Y+K L E
Sbjct: 4 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAASPYQKALDE 48
>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
++ES H + K+IP ++S+RL T S++ +N+ + Y+K L E
Sbjct: 258 HRESNHPPTITKNIPASISKRLSTLSSDKETFNQAAPPYQKALDE 302
>SB_31231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSNE--FFYNEISFYEKVLPE 478
++ES H + K+IP ++RRL+ S++ FF Y+K L +
Sbjct: 101 HRESNHPPSITKNIPAGINRRLSALSSDQAFFDQTAPPYQKALDD 145
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 569 RHGPRRRMRITISGICRTVH 510
RH PR R + T SG+C T+H
Sbjct: 538 RHTPRTRPKFTASGVCITLH 557
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H V K+IP ++++RL+ S+ E F + Y+K L E
Sbjct: 942 HRESNHPPTVTKNIPASINKRLSTLSSDKETFEHAAPPYQKALDE 986
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = +2
Query: 206 TNERLNESLTKWFGEDTTFTHWEYVGDTGKGDSYLSELIRIKIYGLNSNKESKHVQCVLK 385
T + E+L+K E F+HW + T + + +++ + + S+KE+ H L
Sbjct: 187 TGDECQETLSKSAMEMDAFSHWYFAKKTKWRLTEILQILGTRGFEYISHKETTHRGVPLW 246
Query: 386 SIPKNVSRRLTFRSNEFFYNEISFYEKVL 472
+ V +FR++ F++ Y V+
Sbjct: 247 VVQAKVGCGRSFRADPRFHSCREKYTAVM 275
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 417 RSAAMSSSITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSMT 569
R+A + S RS RK+YL Y+S+ + + R AR + ++T
Sbjct: 2388 RAARLIQSYYRSCVARKAYLRYRSACVRMQALVRGKQAREAFMELKMATVT 2438
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 76 IRCLLILKRYLITENFLNIIQILFKAKQNGRRLQNVDRRVSSHHQRETERISHQMVRRGH 255
+R LL KR+L + I+Q ++A +GRR + + +H+ I+ Q RG
Sbjct: 2012 VRALLARKRFLEMKTATLILQKRYRALNHGRRER------AEYHRARAAVITIQAYIRGT 2065
Query: 256 NLHPLGVCRRHR 291
L RRHR
Sbjct: 2066 QARDL--ARRHR 2075
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
++ES H + K+IP ++++RL T S++ +N+ + Y+K L E
Sbjct: 1283 HRESNHPPTITKNIPASINKRLSTLSSDKETFNQAAPPYQKALDE 1327
>SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3)
Length = 466
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
++ES H + K+IP ++++RL T S++ +N+ + Y+K L E
Sbjct: 389 HRESNHPPTITKNIPASINKRLSTLSSDKETFNQAAPPYQKALDE 433
>SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
++ES H + K+IP ++++RL T S+E +++ + Y+K L E
Sbjct: 50 HRESNHQPTITKNIPASINKRLSTLSSDEETFDQAAPPYQKALDE 94
>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRL-TFRSNEFFYNEIS-FYEKVLPE 478
++ES H + K+IP ++++RL T S+E +++ + Y+K L E
Sbjct: 55 HRESNHQPTITKNIPASINKRLSTLSSDEETFDQAAPPYQKALDE 99
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 337 HRESNHPSTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 381
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = +3
Query: 426 AMSSSITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSM---TSFVWEDESI 596
++S + T SYL Y SS P+N S + +W+++ I
Sbjct: 539 SLSGGVRPEADTSGSYLQYPSSVGMTRPVNGYNPYTTAVSQAPDNDLIWDNDLIWDNDLI 598
Query: 597 YDY 605
+DY
Sbjct: 599 WDY 601
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 380 LKSIPKNVSRRLTFRSNEFFYNEISFYEKVLPELSKFRASKSANEPFDKCPK 535
+ S+PK + TF+ N+ +NE+ + + +++ A K + E +D+ K
Sbjct: 578 MPSVPK--FHQATFQPNKMTFNELGQFRSEMKNMTQKLAEKRSKEDYDRTVK 627
>SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 81 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 125
>SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 153 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQATPPYQKALDE 197
>SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 48 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 92
>SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 145
>SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9)
Length = 285
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 153 HRESSHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 197
>SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 55 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 99
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 177 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 221
>SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)
Length = 243
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 172 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 216
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 48 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 92
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 181 HRESNHQPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 225
>SB_56667| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 628
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSNE 433
++ES H ++K+IP ++RRL+ S++
Sbjct: 334 HRESNHPPSIIKNIPAGINRRLSALSSD 361
>SB_20527| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
Length = 671
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSNE 433
++ES H ++K+IP ++RRL+ S++
Sbjct: 420 HRESNHPPSIIKNIPAGINRRLSALSSD 447
>SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRS--NEFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S E F Y+K L E
Sbjct: 68 HRESNHPTTITKNIPASINKRLSTLSADKETFDQAAPPYQKALDE 112
>SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9)
Length = 163
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYKKALDE 145
>SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 101 HRESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYKKALDE 145
>SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035)
Length = 391
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
++ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 77 HRESNHPLTITKNIPTSINKRLSTLSSDKETFDQATPPYQKALDE 121
>SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 173 FKTLTGVSPLITNERLNESLTKWFGEDTTFTHWEYVGDTGKG 298
F L+ P+ + RL+ESL + FG T H + + G G
Sbjct: 65 FSQLSTSRPIASISRLHESLKRSFGRPTGLDHDNIITNMGGG 106
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 353 KESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVLPE 478
+ES H + K+IP ++++RL+ S+ E F Y+K L E
Sbjct: 62 RESNHPPTITKNIPASINKRLSTLSSDKETFDQAAPPYQKALDE 105
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 350 NKESKHVQCVLKSIPKNVSRRLTFRSN--EFFYNEISFYEKVL 472
++ES H + K+IP ++++RL+ S+ E F Y+K L
Sbjct: 1146 HRESNHPPTITKNIPASINKRLSTLSSDKEIFDQAAPPYQKAL 1188
>SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079)
Length = 754
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 124 LNIIQILFKAKQNGRRLQNVDRRVSSHHQRETERISHQMVRRGHNLHPLG 273
+N Q+ F + G+ L N D R S+ +Q + ++H + R HP+G
Sbjct: 307 VNGYQVFFDDRPLGKAL-NADTR-SADYQLSSSPVTHVITARSLTCHPIG 354
>SB_30266| Best HMM Match : Fzo_mitofusin (HMM E-Value=1.2)
Length = 1052
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 441 ITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSMTSFVWEDESIYDYR 608
+ R ++T SY+ Q+ + A M S +++ G +F +DE++ YR
Sbjct: 488 LNRKLNTTDSYMPQQAYDEADASMESSLTLPTDALNSTPGPHLAFTEDDETVPTYR 543
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,511,334
Number of Sequences: 59808
Number of extensions: 371267
Number of successful extensions: 1219
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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