Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0127
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 54 1e-07
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 52 4e-07
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 50 3e-06
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 50 3e-06
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 43 3e-04
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 42 7e-04
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 42 7e-04
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 42 7e-04
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 41 0.001
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 41 0.001
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 41 0.001
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 41 0.001
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 40 0.002
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 38 0.009
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 38 0.009
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 38 0.009
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 38 0.009
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 38 0.009
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 38 0.009
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 38 0.012
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 38 0.012
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 37 0.021
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 35 0.065
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 33 0.35
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 29 3.2
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 29 5.6
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 28 7.4
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 28 7.4
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 28 7.4
AY119086-1|AAM50946.1| 477|Drosophila melanogaster LP11230p pro... 28 7.4
AE014296-1941|AAN11886.2| 477|Drosophila melanogaster CG7573-PB... 28 7.4
AE014296-1940|AAF50072.2| 509|Drosophila melanogaster CG7573-PA... 28 7.4
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 28 7.4
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 28 7.4
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein. 28 9.8
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro... 28 9.8
AE014298-1272|AAO41642.2| 1248|Drosophila melanogaster CG7766-PB... 28 9.8
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,... 28 9.8
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,... 28 9.8
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Frame = +3
Query: 9 KPACHPKDVFLPSDDEEIIKALHIQNEDIFRDLSQEDKETTIKFKK-RTKNPKTAHVIVQ 185
KP DV EE ++ LH N D L+Q K + K + T +V ++
Sbjct: 308 KPKVIVYDVDTAIGPEEFMQELHENNFDSEMTLAQFKKSVHLVTKAWSATDGATVNVTLE 367
Query: 186 VGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGP- 362
V ++ + G +Y+ R Q C RC+ F H C + C CG
Sbjct: 368 VDDRAMAKL-DVGRVYIKWFSFRCRSQVRTYACHRCVGFDHKVSECRQKESVCRQCGQQG 426
Query: 363 HLREKCADFIAGTEPQCCNCSHSGLRKADHNAFSAECPI 479
H KC + + C NC H G + + H S CPI
Sbjct: 427 HTAAKCQNPV-----DCRNCRHRG-QPSGHYMLSNACPI 459
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 52.4 bits (120), Expect = 4e-07
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 10/158 (6%)
Frame = +3
Query: 75 HIQNEDIFRDLSQEDKETTIKFKKR---TKNPKTAHV-IVQVGPVV--WQRMTEAGALYL 236
HI + I ++L + K KR N T ++ +V+ G ++ ++ + +
Sbjct: 112 HIDEDTILQELKPQKVSEVKKIMKRQNPNSNSDTNNITLVETGLIIITFESHKLPEIVRI 171
Query: 237 DLQRIRVEDQSPL-IQCTRCLAFGHGRKFCTESVDRCSHCG-GPHLR--EKCADFIAGTE 404
+ +RV D PL ++C +CL FGH C +SV+ C +C H EKC + E
Sbjct: 172 GYETVRVRDYIPLPLRCKKCLRFGHPTPIC-KSVETCINCSETKHTNDGEKCTN-----E 225
Query: 405 PQCCNCSHSGLRKADHNAFSAECPIPKKWDYLARANTT 518
C NC ++ H+ +CP K L TT
Sbjct: 226 KNCLNCRNNPELDHQHSPIDRKCPTFIKNQELTAIKTT 263
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 105 LSQEDKETTIKFKKRTKNPKTAHVIVQVGPVVWQ--RMTEAGALYLDLQRIRVEDQSPLI 278
++++D E T FK R ++ ++ GP V + ++T G + ++R + L+
Sbjct: 315 VNEDDNEATKNFKTRQN---LFYINLKQGPNVKESLKITRLGRYRVTVER--ATRRKELL 369
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHSGLRKADHNA 458
QC RC FGH + +C + C C GPH+ A C C + G DH +
Sbjct: 370 QCQRCQIFGHSKNYCAQD-PICGKCSGPHMTG-----FALCISDVCLCINCG---GDHVS 420
Query: 459 FSAECPI 479
CP+
Sbjct: 421 TDKSCPV 427
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 105 LSQEDKETTIKFKKRTKNPKTAHVIVQVGPVVWQ--RMTEAGALYLDLQRIRVEDQSPLI 278
++++D E T FK R ++ ++ GP V + ++T G + ++R + L+
Sbjct: 349 VNEDDNEATKNFKTRQN---LFYINLKQGPNVKESLKITRLGRYRVTVER--ATRRKELL 403
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHSGLRKADHNA 458
QC RC FGH + +C + C C GPH+ A C C + G DH +
Sbjct: 404 QCQRCQIFGHSKNYCAQD-PICGKCSGPHMTG-----FALCISDVCLCINCG---GDHVS 454
Query: 459 FSAECPI 479
CP+
Sbjct: 455 TDKSCPV 461
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C + RC C G HL C
Sbjct: 634 LKQIGGQRVDIER-KNRTREP-VQCYRCQGFRHAKNSCMKP-PRCMKCAGDHL-SSCCTK 689
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 690 PRSTPATCVNCS 701
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C RC C G HL C
Sbjct: 626 LKQIGGQRVDIER-KNRTRDP-VQCYRCQGFRHAKNSCMRP-PRCMKCAGEHL-SSCCTK 681
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 682 PRTTPATCVNCS 693
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C RC C G HL C
Sbjct: 604 LKQIGGQRVDIER-KNRTREP-VQCYRCQGFRHAKNSCMRP-PRCMKCAGEHL-SSCCTK 659
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 660 PRTTPATCVNCS 671
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +3
Query: 243 QRIRVED---QSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKC-ADFIAGTEPQ 410
+RI VE+ ++ +QCT C +GH R +CT C CG H ++C + E +
Sbjct: 24 RRITVEEPHKRNAPVQCTNCQEYGHTRSYCT-LAPVCVVCGDLHDSKQCQINKENACEKK 82
Query: 411 CCNCSHSGLRKADHNAFSAECPIPKK 488
C NC +H A CPI K+
Sbjct: 83 CNNCG------GNHTANYRGCPIYKE 102
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C RC C G HL C
Sbjct: 641 LKQLGGQRVDIER-KNRTREP-VQCYRCQGFRHSKNSCMRP-PRCMKCAGGHL-SSCCTK 696
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 697 PRTTPATCVNCS 708
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKCADFIAGTEPQCCNCSHSG 434
+C +C FGH + C E +RC C G H+ + C P C C+ +G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRCNKTG 105
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 VEDQSPL-IQCTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKC 380
V ++ P + C +C GH K C E+ C CG HLR +C
Sbjct: 115 VNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKCADFIAGTEPQCCNCSHSG 434
+C +C FGH + C E +RC C G H+ + C P C C+ +G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRCNKTG 105
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 VEDQSPL-IQCTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKC 380
V ++ P + C +C GH K C E+ C CG HLR +C
Sbjct: 115 VNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGG-PHLREKCADFIAGTEPQCCNCSHSG 434
+C +C FGH + C E +RC C G H+ + C P C C+ +G
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ---ADNPTCYRCNKTG 105
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 VEDQSPL-IQCTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKC 380
V ++ P + C +C GH K C E+ C CG HLR +C
Sbjct: 115 VNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Frame = +3
Query: 48 DDEEIIKALHIQNEDIFRDLSQEDKETTIKFKKRTKNPKTAHVIVQVGPVVWQRMTEAGA 227
D+ + LH F+ + E ++ ++R + A V++ + + G
Sbjct: 334 DETTTAQDLHNSLVSQFQGIRLEPEDVR-GLRRRRDGTQIASVLMCANDAI--AVINRGV 390
Query: 228 LYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDR---CSHCG-GPHLREKCADFIA 395
+ + R R+ I+C RCL FGH +C +SVDR C CG H + C
Sbjct: 391 VTVGWSRCRIAQDVRPIRCFRCLEFGHRAPYC-KSVDRSDCCLRCGEHGHKAKGCV---- 445
Query: 396 GTEPQCCNCSHSGLRKADHNAFSAECPIPK 485
P+C CS S + K +H CP K
Sbjct: 446 -APPRCLICS-SDVDK-NHATGGFACPTYK 472
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 231 YLDLQRIRVEDQSPLI---QCTRCLAFGHGRKFCT-ESVDRCSHCGGPHLREKC-ADFIA 395
YL +RI VE+ I QCT C +GH + +CT +SV C C PH C +
Sbjct: 364 YLLHRRITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSV--CVVCSEPHTTANCPKNKDD 421
Query: 396 GTEPQCCNC 422
+ +C NC
Sbjct: 422 KSVKKCSNC 430
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +3
Query: 150 TKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQ---SPLIQCTRCLAFGHGRKF 320
T+NP H + V + L Q ++VE + QC RC FGH + +
Sbjct: 748 TRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNY 807
Query: 321 CTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHS 431
C +C CG H C C NC+ S
Sbjct: 808 CRNPF-KCMKCGQLHATVSCTK-PKNLPATCANCNGS 842
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 231 YLDLQRIRVEDQSPLI---QCTRCLAFGHGRKFCT-ESVDRCSHCGGPHLREKC-ADFIA 395
YL +RI VE+ I QCT C +GH + +CT +SV C C PH C +
Sbjct: 208 YLLHRRITVEEPHKRINPVQCTNCQEYGHTKAYCTLKSV--CVVCSEPHTTANCPKNKDD 265
Query: 396 GTEPQCCNC 422
+ +C NC
Sbjct: 266 KSVKKCSNC 274
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +3
Query: 150 TKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQ---SPLIQCTRCLAFGHGRKF 320
T+NP H + V + L Q ++VE + QC RC FGH + +
Sbjct: 748 TRNPMRIHEVEVVPKADGSHLKVLLIKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNY 807
Query: 321 CTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHS 431
C +C CG H C C NC+ S
Sbjct: 808 CRNPF-KCMKCGQLHASVSCTK-PKNLPATCANCNGS 842
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +3
Query: 150 TKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQ---SPLIQCTRCLAFGHGRKF 320
T+NP H + V + L Q ++VE + QC RC FGH + +
Sbjct: 671 TRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNY 730
Query: 321 CTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHS 431
C +C CG H C C NC+ S
Sbjct: 731 CRNPF-KCMKCGQLHATVSCTK-PKNLPATCANCNGS 765
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +3
Query: 150 TKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQ---SPLIQCTRCLAFGHGRKF 320
T+NP H + V + L Q ++VE + QC RC FGH + +
Sbjct: 671 TRNPMRIHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNY 730
Query: 321 CTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHS 431
C +C CG H C C NC+ S
Sbjct: 731 CRNPF-KCMKCGQLHATVSCTK-PKNLPATCANCNGS 765
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C RC G HL C
Sbjct: 219 LKQIGGQRVDIER-KNRTREP-VQCYRCQGFRHAKNSCMRP-PRCMKSAGEHL-SSCCTK 274
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 275 PRTTPATCVNCS 286
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 210 MTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADF 389
+ + G +D++R + + P +QC RC F H + C RC G HL C
Sbjct: 219 LKQIGGQRVDIER-KNRTREP-VQCYRCQGFRHAKNSCMRP-PRCMKSAGEHL-SSCCTK 274
Query: 390 IAGTEPQCCNCS 425
T C NCS
Sbjct: 275 PRTTPATCVNCS 286
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 279 QCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHS 431
QC RC FGH + +C +C CG H C C NC+ S
Sbjct: 4 QCHRCQCFGHTKNYCRNPF-KCMKCGQLHATVSCTK-PKNLPATCANCNGS 52
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 35.1 bits (77), Expect = 0.065
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 264 QSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEP--QCCNCSHSG 434
++ ++QC RC GH K+C ++ C C G H + C T P + C C + G
Sbjct: 281 RNAIVQCHRCQQIGHTAKYCRKA-HICVKCAGEHPAKDC------TRPRIELCTCYNCG 332
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 255 VEDQSPLIQCTRCLAFGHGRKFCTESVDR---CSHCGGPHLREKCADFIAGTEPQCCNCS 425
+++ P +C RCL GH C +VDR C CG + +C E +C C+
Sbjct: 91 IKELEPRQRCFRCLEEGHIAAHCRSTVDRSQCCFRCGTAGHKAECP-----KEAKCFLCA 145
Query: 426 HSG 434
G
Sbjct: 146 SRG 148
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 348 HCGGPHLREK-CADFIAGTEPQCCNCSH 428
HC HLR C D++AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEAPSCKH 166
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +3
Query: 114 EDKETTIKFKKRTKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQ---- 281
ED + T KR ++ +T Q G + + L ++ V+ +S I+
Sbjct: 404 EDMKPTQAVPKRLQSFETKVSTKQKGCDICSKENHPVRLCPRFLQMSVDSRSGYIKKKQL 463
Query: 282 CTRCLAFGHGRKFCTESVDRCSHCGGPH 365
C C A GH + CT S+ C C G H
Sbjct: 464 CLNCFARGHQLRDCT-SMHSCFTCKGRH 490
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 348 HCGGPHLREK-CADFIAGTEPQCCNCSH 428
HC HLR C D++AG P+ +C H
Sbjct: 163 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 190
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 348 HCGGPHLREK-CADFIAGTEPQCCNCSH 428
HC HLR C D++AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 166
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 27 KDVFLPSDDEEIIKALHIQNEDIFRDLSQEDKETTIKFKKRTKNPKTAHVIVQV 188
K+ + +DEE IK L +ED D+ D++ K KK+ K+P +++V
Sbjct: 685 KNFDIKDEDEEEIKVL---SEDEDEDVMVTDEKNKKKKKKKVKDPNEVKPMLEV 735
>AY119086-1|AAM50946.1| 477|Drosophila melanogaster LP11230p
protein.
Length = 477
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 188 WSRGMAKDDGGWGPLPGPAKDQSRGPVSAHPM 283
W+RG + DD WG + D+ AH +
Sbjct: 302 WNRGFSSDDFDWGQMGAGLNDEQLAAFVAHQL 333
>AE014296-1941|AAN11886.2| 477|Drosophila melanogaster CG7573-PB,
isoform B protein.
Length = 477
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 188 WSRGMAKDDGGWGPLPGPAKDQSRGPVSAHPM 283
W+RG + DD WG + D+ AH +
Sbjct: 302 WNRGFSSDDFDWGQMGAGLNDEQLAAFVAHQL 333
>AE014296-1940|AAF50072.2| 509|Drosophila melanogaster CG7573-PA,
isoform A protein.
Length = 509
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 188 WSRGMAKDDGGWGPLPGPAKDQSRGPVSAHPM 283
W+RG + DD WG + D+ AH +
Sbjct: 334 WNRGFSSDDFDWGQMGAGLNDEQLAAFVAHQL 365
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 348 HCGGPHLREK-CADFIAGTEPQCCNCSH 428
HC HLR C D++AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 166
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 27 KDVFLPSDDEEIIKALHIQNEDIFRDLSQEDKETTIKFKKRTKNPKTAHVIVQV 188
K+ + +DEE IK L +ED D+ D++ K KK+ K+P +++V
Sbjct: 685 KNFDIKDEDEEEIKVL---SEDEDEDVMVTDEKNKKKKKKKVKDPNEVKPMLEV 735
>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
Length = 1893
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 162 KTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQ 281
+ A +V+ GPVV + + GA+Y L + ++ SP+IQ
Sbjct: 908 RAADYLVRTGPVVSLEVAKQGAIYHGLATL-LQQPSPVIQ 946
>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
Length = 2051
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 162 KTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQ 281
+ A +V+ GPVV + + GA+Y L + ++ SP+IQ
Sbjct: 1077 RAADYLVRTGPVVSLEVAKQGAIYHGLATL-LQQPSPVIQ 1115
>AE014298-1272|AAO41642.2| 1248|Drosophila melanogaster CG7766-PB,
isoform B protein.
Length = 1248
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 439 GRPTITLLAPNARYQKSGITWLALTQHMHNLNAGH 543
GRPTITL+A + + I LA+ Q M L +G+
Sbjct: 559 GRPTITLMATHYMLDQDKIP-LAMIQTMRKLKSGY 592
>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
isoform A protein.
Length = 2051
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 162 KTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQ 281
+ A +V+ GPVV + + GA+Y L + ++ SP+IQ
Sbjct: 1077 RAADYLVRTGPVVSLEVAKQGAIYHGLATL-LQQPSPVIQ 1115
>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
isoform B protein.
Length = 1882
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 162 KTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQ 281
+ A +V+ GPVV + + GA+Y L + ++ SP+IQ
Sbjct: 908 RAADYLVRTGPVVSLEVAKQGAIYHGLATL-LQQPSPVIQ 946
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,261,475
Number of Sequences: 53049
Number of extensions: 705841
Number of successful extensions: 2648
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2638
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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