Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0119
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33995| Best HMM Match : Cadherin (HMM E-Value=3e-39) 47 1e-05
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 45 6e-05
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 43 2e-04
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 43 3e-04
SB_5763| Best HMM Match : Cadherin (HMM E-Value=0) 43 3e-04
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 41 0.001
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_35949| Best HMM Match : Cadherin (HMM E-Value=0) 40 0.002
SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 38 0.011
SB_56770| Best HMM Match : Cadherin (HMM E-Value=0) 37 0.015
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_47886| Best HMM Match : Cadherin (HMM E-Value=0) 37 0.015
SB_34938| Best HMM Match : Cadherin (HMM E-Value=1e-25) 37 0.015
SB_28202| Best HMM Match : Cadherin (HMM E-Value=1.8e-29) 37 0.015
SB_24627| Best HMM Match : Cadherin (HMM E-Value=0) 37 0.015
SB_18765| Best HMM Match : Cadherin (HMM E-Value=0) 37 0.015
SB_15712| Best HMM Match : Cadherin (HMM E-Value=0) 37 0.015
SB_36047| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_21336| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_44524| Best HMM Match : Cadherin (HMM E-Value=0) 34 0.11
SB_32317| Best HMM Match : Cadherin (HMM E-Value=1.5e-28) 34 0.14
SB_57964| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 33 0.19
SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08) 33 0.25
SB_4130| Best HMM Match : Cadherin (HMM E-Value=9.3e-29) 33 0.25
SB_50345| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.43
SB_28228| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.43
SB_18678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.43
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_41246| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.43
SB_48962| Best HMM Match : Cadherin (HMM E-Value=0) 31 0.76
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 31 1.3
SB_26949| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_55751| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51258| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.0
SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56813| Best HMM Match : Cadherin (HMM E-Value=5.8e-40) 29 4.0
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9756| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.0
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_46185| Best HMM Match : Flt3_lig (HMM E-Value=3.3) 29 5.3
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 29 5.3
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 28 7.0
>SB_33995| Best HMM Match : Cadherin (HMM E-Value=3e-39)
Length = 632
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +1
Query: 370 GTPITRV--YSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
GT +T+V Y +G+ A V YGLE + S PF I PQTGV+ L E Y+ V
Sbjct: 488 GTTVTKVTAYDQDSGSHALVKYGLE-NADSFPFTITPQTGVIKTTAELRHFERDFYAFVV 546
Query: 541 TAMDGSIP--QRTGSVRNNHRQLRSPTQNTSTTNILTSVST 657
TA D + P + T +V + R+P T + +++T
Sbjct: 547 TATDSTPPFHKVTANVNVHVTDARTPPVFTKVRIAVITITT 587
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T D+ VTY L G + FE+NP TG+VT L ++ SYSL VTAMD
Sbjct: 1340 VTATDRDEGENAKVTYELSV-GDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHG 1398
Query: 559 IPQRT 573
P ++
Sbjct: 1399 KPSQS 1403
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/105 (25%), Positives = 49/105 (46%)
Frame = +1
Query: 259 TVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEA 438
T + + P F P+ ++ + P+ T G +T D AVTY + +
Sbjct: 993 TTVNISIADENDNQPTFTGPSRFNISED--SPTGTRVGQ-LTATDRDIGPNGAVTYAIIS 1049
Query: 439 DGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
F+++P++G+++V TL + SY+L V A D PQ++
Sbjct: 1050 GNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQS 1094
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 394 SDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
+D + V Y L +D V F IN TG++T+ L ++ Y + VTA DG P R+
Sbjct: 828 ADDSSNGDVRYAL-SDNTDV-FSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRS 885
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
V NT G+ I RV + D VTY + + F I+ TG +TV + +
Sbjct: 1431 VTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREAL 1490
Query: 520 RSYSLWVTAMDGSIP 564
SY+L ++A D +P
Sbjct: 1491 ASYNLTISAKDSGVP 1505
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKT--GTEAVT-YGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
V N+ + T + V +D + G AV Y + + F+IN +GV+ L +E
Sbjct: 1603 VRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEK 1662
Query: 520 RSYSLWVTAMDGSIPQRT 573
Y L VTA D +T
Sbjct: 1663 SQYGLEVTATDSKYTAKT 1680
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 379 ITRVYSDK-TGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMD 552
+T SDK G A + Y + + F ++ TGVVTV+ +L ++ SY+L ++ D
Sbjct: 532 VTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTD 591
Query: 553 GSIPQRT 573
P T
Sbjct: 592 RGSPPLT 598
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T +D ++Y + + ++ F ++ TG +T L + SYSL + A DGS
Sbjct: 926 VTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGS 985
Query: 559 I 561
+
Sbjct: 986 L 986
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYS-DKTGTEAVTYGLEADGASVPFEINPQTGVVTV 492
P E N + + +G I +V + D G + +Y +++ S F I+ +TGVV V
Sbjct: 2102 PRFQPTEYNVTISESLPRGASIVQVTARDIDGDKDTSYAIKSMTPSGGFTIDSKTGVVMV 2161
Query: 493 NDTLIDKE 516
+ +D+E
Sbjct: 2162 ASSGVDRE 2169
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
D+ A+T L +G+ F I+ TG V L + +Y L VTA DG P ++
Sbjct: 1141 DEGSNGAITLSLSGEGSD-NFTID-STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSA 1198
Query: 577 SVR 585
+ +
Sbjct: 1199 TAQ 1201
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 406 GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRS-YSLWVTAMDGSIPQ 567
GT A +TY L + A F I +GV+T N +D+E S Y+L+V A+D P+
Sbjct: 1824 GTNARITYNLSRNDA---FMIGASSGVIT-NVRKLDREQVSIYTLYVQAVDQGNPR 1875
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 193 QAKDTDSGGQTITVIMSMGVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKG 372
Q DSGG T TV ++ V ++ P F + + N P +T K
Sbjct: 2148 QVMAKDSGGLTSTVSVTFNV---------ADANNNVPQFTNCGTVSIREN--DPRDT-KI 2195
Query: 373 TPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR-SYSLWVTAM 549
T +T +D+ +TY +E + F I P+TGVV + T +D+EN+ SY+ + A
Sbjct: 2196 TQLTATDADRGQNGQITYSIEDASSQTLFSIEPRTGVVR-SLTSLDRENKDSYNAIIKAE 2254
Query: 550 DGSIPQ 567
DGS Q
Sbjct: 2255 DGSSKQ 2260
Score = 35.5 bits (78), Expect = 0.046
Identities = 28/92 (30%), Positives = 40/92 (43%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVN 495
P + + V G + V + +AVTY +A GA + F ++ TGV+T+N
Sbjct: 2078 PTFLKSAYEFRVAEGAATGESLAIVVAVDADGDAVTYS-KAGGA-LQFSVDQSTGVITLN 2135
Query: 496 DTLIDKENRSYSLWVTAMDGSIPQRTGSVRNN 591
L D Y+L V A D T SV N
Sbjct: 2136 SAL-DPNKNQYTLQVMAKDSGGLTSTVSVTFN 2166
Score = 35.1 bits (77), Expect = 0.061
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 367 KGTPIT-RVYSDKTGT-EAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
+G P RV K T EA+TY L + + F INP TG + L +E R Y L +
Sbjct: 1471 EGVPANHRVAGVKAATSEALTYTLLSGNEAGMFRINPSTGSLDATRELDYEERRRYELKI 1530
Query: 541 TAMD 552
A D
Sbjct: 1531 EARD 1534
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 364 LKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSL 534
+KGT + +V++ D +TY + F IN Q GV+ V+ +L +SL
Sbjct: 1371 VKGTSVLQVHATDLDSGQNGQITYSIIQGNEEEAFTINEQ-GVILVDKSLTTVAADKFSL 1429
Query: 535 WVTAMDGSIPQRTGSV 582
V A D + R+GSV
Sbjct: 1430 KVEARDKNASPRSGSV 1445
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +1
Query: 424 YGLEADGASVPFEINPQTGVVTVNDTLIDKE----NRSYSLWVTAMD 552
Y L +G S F I+P++GVVT+ D+ +D E N Y L VTA D
Sbjct: 406 YSLSGNGVS-KFAIDPESGVVTLTDS-VDYENTPNNHVYDLTVTATD 450
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
VP N GT +T V + E VP++I P TGV+ + +L E +
Sbjct: 598 VPENQPSGTFVTVVVG-RDADEGFNPSYTVITPGVPYKIEPSTGVIRTSKSLDQSELSTR 656
Query: 529 SLWVTAMDGSIPQRTGSVRNN 591
L V + +T + N
Sbjct: 657 ELQVIVRVSTAGSKTADGQVN 677
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 346 FVPSNTLKGTPI--TRVYSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKE 516
F+P NT GT + + Y GT VTY L A F +N TG + V +L +
Sbjct: 918 FIPENTTVGTTVYHAQAYDRDLGTYGHVTYQLIPGRAWDTFAVNKTTGDIKVTRSLDRES 977
Query: 517 NRSYSLWVTAMDG 555
N SYS+ V A DG
Sbjct: 978 NASYSVTVMASDG 990
Score = 36.3 bits (80), Expect = 0.027
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T V D VTY + DG S F I+P TG + V+ TL + RS+ L V A D
Sbjct: 1034 VTAVDMDSGSNSQVTYSI-VDGNS-SFSIDPNTGQIIVHRTLDFEVTRSFILRVQARDNG 1091
Query: 559 IP 564
P
Sbjct: 1092 KP 1093
>SB_5763| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 674
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVY-SDK-TGTEAVTYGLEADGASVPFEINPQTGVVT 489
P + + +V N GTP+ V SDK GT A + + F I+P TG +T
Sbjct: 334 PVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLYTRFAIDPDTGNIT 393
Query: 490 VNDTLIDKENRSYSLWVTAMDGSIPQRTGSVR 585
+ L +E SY+L + A+D +I R G+ R
Sbjct: 394 TREPLNREETGSYTLTLRAVDSAIRAREGTTR 425
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTG 480
H+P + V + G + RV + D V Y + + S+ F +N TG
Sbjct: 436 HVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTG 495
Query: 481 VVTVNDTLIDKENRSYSLWVTAMDGSIP 564
+++ TL ++N SY+L +TA D IP
Sbjct: 496 IISTTSTLDREQNASYTLIITAKDHGIP 523
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 289 SQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEIN 468
+ PP F +P + W + + +D AV Y + + + +N
Sbjct: 225 NDNPPVFSMPG--YTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSI-VENVTDYVTVN 281
Query: 469 PQTGVVTVNDTLIDKENRSY-SLWVTAMDGSIPQRTGS 579
TGV+++ + +D+E Y + + A D +P ++ +
Sbjct: 282 AITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSST 319
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +1
Query: 289 SQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEIN 468
+ QPP F ++ HV N V L + V +D+ V Y L D PF +
Sbjct: 1882 NDQPPEFTSASVAHVSENSRVGDVVLT---VIAVDADEGSNGDVVYSLGLD-IGAPFSLG 1937
Query: 469 PQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSV 582
+ GV+ V+ ++ ++ +YS+ VTA D P + S+
Sbjct: 1938 SKDGVLRVSGSMDREKKANYSIRVTATDLGTPPLSASM 1975
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTG 480
+LP ++ N+ V N KGT + RVY+ DK G +++Y + + + F ++ G
Sbjct: 627 NLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNG--SISYAIVSGDPTNLFLVDSTGG 684
Query: 481 VVTVNDTLIDKENRSYSLWVTAMDGSI----PQRTGSVRNNHRQLRSPTQNTSTTNILTS 648
++ +N + +E Y L V A G++ Q T ++ R +P +TS+ +
Sbjct: 685 IIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDID 744
Query: 649 VSTLRQRGLYN 681
+ L + +YN
Sbjct: 745 GTWLVGQVVYN 755
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYS---DKTGTEAVTYGLEADG--ASVPFEINPQ 474
H P + NT G I RV + D + Y ++ D ++ F+++
Sbjct: 232 HAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSS 291
Query: 475 TGVVTVNDTLIDKENRSYSLWVTAMDGSIPQR 570
TGV+ L + SY+ V A DG +P +
Sbjct: 292 TGVIRTKQNLDFEVKNSYTFNVIASDGGVPSK 323
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVN 495
P +H +++ + T G I V T T+ + F+++ GVV V
Sbjct: 2403 PRFLHPDQSISISELTRVGMEILTV----NATGHTTFDIAGGNHGDAFDVDAVQGVVKVK 2458
Query: 496 DTLIDKENRSYSLWVTAMDGSIPQRTGSVR 585
L + +Y+L + A DGS+P G R
Sbjct: 2459 TPLDYERYPNYTLIIGAYDGSVPPHVGYAR 2488
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +1
Query: 373 TPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMD 552
T +T V D + ++ YG+ A F ++ TG V L + Y L VTA D
Sbjct: 3266 TNVTAV-DDDSDIRSIRYGISAGNTGNAFVMDAVTGFVRTAAELDREAIAEYRLTVTATD 3324
Query: 553 GSIPQRTGS 579
P TG+
Sbjct: 3325 NGTPPMTGN 3333
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKT-GTE-AVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR 522
V ++ +T V D+ G++ +VTY + F IN TG + + L D+E +
Sbjct: 2105 VSEGVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIGITAKL-DRETK 2163
Query: 523 S-YSLWVTAMDGSIP 564
S Y+L V A DG P
Sbjct: 2164 SKYTLRVQATDGGSP 2178
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRV---YSDKTGTEAVTYGLEADGASVPFEINPQTGVV 486
P + V N + GT + V Y + + Y L +D + FE+ TGVV
Sbjct: 1464 PTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVV 1523
Query: 487 TVNDTLIDKE--NRSYSLWVTAMDGSIPQ-RTGS 579
ID+E S++L V A+D P RT S
Sbjct: 1524 KTTRG-IDREGMGASFNLVVYAVDKQGPSARTSS 1556
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS--DKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
VP G + V + + +G A V Y L G PF+++ TG+VT +D L +
Sbjct: 2512 VPEGKSAGVSVLTVLASDEDSGVNAEVEYHLVGSG---PFQVSRTTGLVTTSDVLDRELV 2568
Query: 520 RSYSLWVTA 546
SY+L V A
Sbjct: 2569 GSYTLKVRA 2577
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
D+ V+Y + F+++ Q+G+VT L ++ S ++ +TA D +TG
Sbjct: 483 DEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTG 542
Query: 577 S 579
S
Sbjct: 543 S 543
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1
Query: 193 QAKDTDS-GGQTITVIMSMGVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLK 369
QA D ++ ++TV +S G +TV LV+T + + PA + + V N
Sbjct: 754 QALDHEAVSSYSLTVSVSDGT-VTVTTALVITVTNRNDA---PAFSNAPYSASVAENNAG 809
Query: 370 GTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAM 549
T +D+ + +TY + G+ F I+ TGVVT+ L ++ YSL + +
Sbjct: 810 SAVYTVSATDEDSGDTMTYFISGTGSG-DFSIDSSTGVVTLARALNYEDTTYYSLSILVL 868
Query: 550 DG 555
DG
Sbjct: 869 DG 870
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
V N + +T +D +VTY L G+S F ++P +GVV + L + +Y
Sbjct: 414 VAENDAAASVVTVAATDPDVGNSVTYSLTGSGSS-HFTVHPTSGVVILTQALDYETKPTY 472
Query: 529 SLWVTAMDG 555
SL V A DG
Sbjct: 473 SLTVAASDG 481
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 358 NTLKGTPITRVYS-DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSL 534
+++ GT +TR+ + D + +TY L S F IN TGV++ N + +Y+
Sbjct: 2696 DSVAGTSVTRITATDADIGDVITYSLSGP-ESTNFTINVNTGVISTNSAFDRESKDTYTF 2754
Query: 535 WVTAMD-GSIP 564
+TA D GS P
Sbjct: 2755 TITATDTGSRP 2765
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +1
Query: 313 LPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTV 492
LP + + V NT + +T +D+ ++ +T+ L G+ + F I+P +GVV+V
Sbjct: 1701 LPLFVDAPFSASVNENTTTVSLLTLTATDEDSSDMLTFSLLGPGSEL-FSIHPTSGVVSV 1759
Query: 493 NDTLIDKENRSYSLWVTAMDGSIPQRTGSV 582
L + Y L V DG T S+
Sbjct: 1760 TSALDAEVTSLYVLTVRVSDGKGGVNTSSL 1789
Score = 36.3 bits (80), Expect = 0.027
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYS-DKTGTEAVTYGLEADGASVPFEINPQTGVVTV 492
P + N V N GT + V + D+ +TY L + F I+ +G+VT
Sbjct: 694 PQFLSTPYNTAVDENLGTGTSVISVSAIDQDSGNTLTYSLSGTN-NAHFSISSASGLVTT 752
Query: 493 NDTLIDKENRSYSLWVTAMDGSIPQRTGSV 582
L + SYSL V+ DG++ T V
Sbjct: 753 AQALDHEAVSSYSLTVSVSDGTVTVTTALV 782
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
V +L GT + V + + +TY L G+S F I+ TGVVT L + SY
Sbjct: 607 VSEGSLVGTAVYDVNATDADGDTLTYSLYGAGSS-SFSISSATGVVTTAKALDYEAVTSY 665
Query: 529 SLWVTAMDGS 558
+L + DG+
Sbjct: 666 TLTIRVTDGN 675
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 370 GTPITRVYS-DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN-RSYSLWVT 543
GT + +V + D+ + ++Y L S F I TGV+T L+D+E SYSL V+
Sbjct: 1102 GTTVLKVIAIDEDSADTLSYSLSGSN-SAHFAIGSSTGVITTAQ-LLDRETVNSYSLTVS 1159
Query: 544 AMDGS 558
DG+
Sbjct: 1160 VSDGT 1164
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 361 TLKGTPITRVYSDK--TGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYS 531
T GT + V++ TG A +TY + A F +N TG++ TL ++ SY+
Sbjct: 5106 TSAGTDVIPVHATDVDTGINAEITYSIVGGDAKNQFSVN-STGMIRTIATLDREDIASYT 5164
Query: 532 LWVTAMDGSIPQRTGSV 582
L V A D +P +T +V
Sbjct: 5165 LLVQASDRGVPPQTETV 5181
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 412 EAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+ + + L G S F +NP TGV+T+ L + + +YSL + A DG+
Sbjct: 1018 DTLVFSLSGTG-STSFSMNPSTGVITLTAALNYETSPAYSLTIRADDGN 1065
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T + +D+ G +++TY + F I+P TG++ L + SY+L + DGS
Sbjct: 1822 VTLIATDQDG-DSLTYSISGTNHG-HFSISPSTGLIQTAQILDYESVNSYTLTASVTDGS 1879
Query: 559 IPQRTGSVRNNHRQLRSPTQNTSTTNI 639
+ T + PT ++S N+
Sbjct: 1880 VTVTTSVTISVTNTNDPPTLSSSYYNV 1906
Score = 33.9 bits (74), Expect = 0.14
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +1
Query: 184 EATQAKDTDS-GGQTITVIMSMG-VWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPS 357
+ Q D +S T+T ++ G V +T + + +T++ PP + N +
Sbjct: 1856 QTAQILDYESVNSYTLTASVTDGSVTVTTSVTISVTNTNDPP-----TLSSSYYNVSINE 1910
Query: 358 NTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRS-YSL 534
N + I SD G + +TY L G+ F +N TG++T+ T +D E+RS YSL
Sbjct: 1911 NDAALSVIDITGSDSDG-DTLTYSLTGTGSG-DFSMNSATGLITL-ATALDYESRSAYSL 1967
Query: 535 WVTAMD 552
+ D
Sbjct: 1968 TIRVTD 1973
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 349 VPSNTLKGTPITRVY-SDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRS 525
+ N++ GT I V SD + +TY L G+S + TGV+ V+ +L + +
Sbjct: 316 IHENSVNGTDIITVTASDVDSGDTITYSLSGSGSSSFSALT--TGVIEVSGSLDFEATPT 373
Query: 526 YSLWVTAMD 552
Y+L +TA D
Sbjct: 374 YTLTLTATD 382
Score = 32.3 bits (70), Expect = 0.43
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DKT-GTEAV-TYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P N G + RV + D+ G A TY + F I TGV+T L +
Sbjct: 4997 IPENMASGASVARVATTDRDIGINANHTYSITGGDGLGKFSIVQSTGVITALPGLDYETK 5056
Query: 520 RSYSLWVTAMDGSIPQ--RTGSVR------NNHRQLRSPTQNTSTTNILTSVST 657
+Y L +TA D PQ VR N+++ + SPT ++ + TS T
Sbjct: 5057 YTYYLSITARDRGSPQLYAVAGVRIFLSDTNDNKPVFSPTLYLTSISEATSAGT 5110
Score = 31.9 bits (69), Expect = 0.57
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRV-YSDK-TGTEA-VTYGLEADGASVPFEINPQTG 480
+ P+ E N + T GT + + SD +G + +TY + + PF I+ +G
Sbjct: 3436 YTPSFSQSEYNVTISEATPIGTTVIDIDASDNDSGPQGELTYSMPSGS---PFYIDSLSG 3492
Query: 481 VVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTST 630
V+T+ L + SY L VTA DG S+ N ++ N T
Sbjct: 3493 VITLKQGLDYEAVTSYVLLVTATDGDASSPKSSMVNVTVTVKDENDNEPT 3542
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSI----P 564
D+ ++ +TY L S F + TG++T + L + SY+L +T DG+ P
Sbjct: 1632 DEDASDTLTYTLSGTN-STHFTMATSTGIITTAEGLDYESLTSYTLTITVSDGTASVTQP 1690
Query: 565 QRTGSVRNNHRQL-------RSPTQNTSTTNILTSVST 657
+ +N L S +NT+T ++LT +T
Sbjct: 1691 ITITVIDSNDLPLFVDAPFSASVNENTTTVSLLTLTAT 1728
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVN 495
P N + NT T I +V + ++++T+ +S F I+ +G++T
Sbjct: 2483 PVFTDAPYNATINENTSTATSILQVSTTDQDSDSITFSFVGVTSS-DFNIHSSSGIITTA 2541
Query: 496 DTLIDKENRSYSLWVTAMDGS 558
+ ++ +Y+L + A DG+
Sbjct: 2542 VNINYEKTAAYTLTIQADDGN 2562
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 394 SDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMD 552
+D+ ++V++ + G+S F ++P TGVVT++ L + Y+L + A D
Sbjct: 1357 TDQDSGDSVSFTMYGSGSSY-FTLHPTTGVVTLSRALDYETTPLYTLTIIASD 1408
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +1
Query: 208 DSGGQTITVIMSMGVWLTVAGCLVLTSSQQ--PPGFH-LPAIMHVERNWFVPSNTLKGTP 378
++ +TV +S G TV+ L + Q PP F P ++ N S+
Sbjct: 2158 EASQHVLTVRVSDGRGGTVSTSLTIKVQNQNDPPVFRGTPYTTSIDENLSAGSSVF---- 2213
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+ +D+ + TY + +S F + TG++T L ++ SYSL VT D +
Sbjct: 2214 -VAIATDEDNGDTCTYSISGVNSS-DFTMASATGILTTLKVLDFEQLNSYSLTVTVTDST 2271
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 545 AVTHREYERFSLSIKVS---LTVTTPV*GLISNGTDAPSASRPYVTASV 408
A+ H +SL++ VS +TVTT + ++N DAP+ S +ASV
Sbjct: 755 ALDHEAVSSYSLTVSVSDGTVTVTTALVITVTNRNDAPAFSNAPYSASV 803
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 418 VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMD 552
VTY + + + F I P G + V L + SYSL +TA D
Sbjct: 3685 VTYTITSGNSEDKFYIRPSDGSIFVKKGLDRESTPSYSLVITASD 3729
>SB_35949| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 521
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTG 480
+LP ++ N+ V N KGT + RVY+ DK G +++Y + + + F ++ G
Sbjct: 91 NLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNG--SISYAIVSGDPTNLFLVDSTGG 148
Query: 481 VVTVNDTLIDKENRSYSLWVTAMDGSI----PQRTGSVRNNHRQLRSPTQNTSTTNILTS 648
++ +N + +E Y L V A G++ Q T ++ R +P +TS+ +
Sbjct: 149 IIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDID 208
Query: 649 VSTLRQRGLYN 681
+ L + +YN
Sbjct: 209 GTWLVGQVVYN 219
>SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3824
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = +1
Query: 268 GCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVY-SDKT-GTEA-VTYGLEA 438
G L L+ + + + P +V + +P N GT I +V SDK GT A + Y +E
Sbjct: 333 GFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIET 392
Query: 439 DG-ASVPFEINPQTGVVTVNDTLIDKE-NRSYSLWVTAMD-GSIPQRTGS 579
F I+P TGV+ VN+ +D E RSY + V A D GS Q + S
Sbjct: 393 HSDPQAIFGIHPTTGVI-VNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSS 441
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTV 492
P I + N VP NT T + + D +G + + Y +++ F+IN +TG++
Sbjct: 1513 PIITWIYEN--VPINTNVTT--IKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQT 1568
Query: 493 NDTLIDKENRSYSLWVTAMDGSIPQR 570
+ +E YSL V A D + ++
Sbjct: 1569 THPIDREEISEYSLKVRATDQAFTEQ 1594
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTV--NDTLIDKENR 522
+P N+ G+ IT V + + VTY + + F ++P TGV++V D L + +
Sbjct: 2151 IPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTK 2210
Query: 523 SYSLWVTA 546
++ L + A
Sbjct: 2211 NFRLHLVA 2218
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 448 SVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDG 555
+ PF ++P+ G+VT + TL + SY+ V A DG
Sbjct: 720 NTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDG 755
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 304 GFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGV 483
GFH + R +++P + GT + R+ +++ L A G +P ++ GV
Sbjct: 141 GFHASSATSEVRTFYIPEGSPTGTEVGRI---PVRVQSI---LLASG--IPADLEYNAGV 192
Query: 484 VTVNDTLIDKENRS-YSLWVTAMDGSIPQRTGSV 582
+T T++D+E S Y+L T ++ S P ++ +V
Sbjct: 193 ITTK-TVLDREKVSAYNL--TIVEFSTPPKSYTV 223
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRS 525
+ +T G +T V + T E+ +TY L++ F + G V++ L ++
Sbjct: 2361 IREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGMFSVGRFNGAVSLLKRLDYEKTNK 2420
Query: 526 YSLWVTAMDG 555
YSL + DG
Sbjct: 2421 YSLNIAVSDG 2430
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 394 SDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQR 570
SD+ VTY + A F ++ QTG +T + L + SY + A DG R
Sbjct: 1222 SDEGSNGHVTYRFDTQVAQ--FIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPR 1278
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 457 FEINPQTGVVTVNDTLIDKEN--RSYSLWVTAMDGSIPQRTGS 579
F ++ TG +++ LID N RSY+L V A DG P R+ +
Sbjct: 1033 FNLDSNTGALSLTK-LIDYGNSARSYTLPVQAQDGGSPPRSST 1074
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 37.5 bits (83), Expect = 0.011
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +1
Query: 223 TITVIMSMGVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYS-D 399
TITV S L A +++ + ++P + VP N G I + + D
Sbjct: 3497 TITVHDSGDPMLNAAQPAIVSITVLDENDNIPVFDQEVYSVSVPENITVGGHILLLNARD 3556
Query: 400 KT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
K G A + Y L+ S F IN TG +T+ + +E SYS V A DG + T
Sbjct: 3557 KDEGVNAEIRYFLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLT 3616
Query: 574 GS 579
GS
Sbjct: 3617 GS 3618
Score = 36.7 bits (81), Expect = 0.020
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DKT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
VP N G I + + DK G A + Y L+ AS F +N TG +T+ + +E
Sbjct: 3102 VPENITVGAHILLLNAKDKDEGVNAEIRYFLKDVIASKRFSMNDTTGQITIKQAVDYEER 3161
Query: 520 RSYSLWVTAMDGSIPQRTGS 579
SYS V A DG + TGS
Sbjct: 3162 SSYSFEVFASDGGEARLTGS 3181
Score = 35.9 bits (79), Expect = 0.035
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DKT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P N G I + + DK G A + Y L+ AS F +N TG +T+ + +E
Sbjct: 4413 IPENITVGAHILLLNAKDKDEGVNAEIRYFLKDLIASKRFSMNDTTGQITIKQAVDYEER 4472
Query: 520 RSYSLWVTAMDGSIPQRTGS 579
SYS V A DG + TGS
Sbjct: 4473 SSYSFEVFASDGGETRLTGS 4492
Score = 35.9 bits (79), Expect = 0.035
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +1
Query: 223 TITVIMSMGVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYS-D 399
TITV S L A +++ + ++P + +P N G I + + D
Sbjct: 4808 TITVHDSGDPMLNAAQPAIVSITVLDENDNVPVFDQEVYSVSIPENITVGAHILLLNARD 4867
Query: 400 KT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
K G A + Y L+ S F +N TG +T+ + +E SYS V A DG + T
Sbjct: 4868 KDEGVNAEIRYFLKDAIVSKRFSMNDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLT 4927
Query: 574 GS 579
GS
Sbjct: 4928 GS 4929
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DKT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P N G I + + DK G A + Y L+ S F +N TG +T+ + +E
Sbjct: 3976 IPENITVGAHILLLNARDKDEGVNAEIRYFLKDAIVSKRFSMNDTTGQITIKQAVDYEER 4035
Query: 520 RSYSLWVTAMDGSIPQRTGS 579
SYS V A DG + TGS
Sbjct: 4036 SSYSFEVFASDGGEARLTGS 4055
Score = 34.7 bits (76), Expect = 0.081
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 394 SDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
SD T + +G+ F +N + GV+ +N +L +E + Y+L V+ D P+R
Sbjct: 2912 SDSTSNAQLNFGITEGNVKNTFYVNTE-GVIYLNRSLDFEERKVYNLSVSVEDSGTPKRK 2970
Query: 574 GSVRNN 591
+ N
Sbjct: 2971 AVIEAN 2976
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGA 447
VL ++ PP F+ + +VE + N GT + +++ D+ V Y +
Sbjct: 2560 VLDANDNPPIFN-QSEYYVE----MYENVTSGTQVLTLFAHDRDEGINGQVFYYIVTSSV 2614
Query: 448 SVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGS 579
F N TGVV++ L + Y++ V A DG P RT S
Sbjct: 2615 KGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPPRTAS 2658
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GTP+T+V + D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 3647 NVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEY 3706
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 3707 TLVIQATDCGDPPLNSS 3723
Score = 34.3 bits (75), Expect = 0.11
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Frame = +1
Query: 223 TITVIMSMGVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYS-D 399
TITV S L A ++ + ++P + +P N G I + + D
Sbjct: 5245 TITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVYSVSIPENITVGAHILLLNARD 5304
Query: 400 KT-GTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRT 573
K G A + Y L+ AS F +N TG +T+ + +E SYS V A D + T
Sbjct: 5305 KDEGVNAEILYFLKDVIASKRFSMNDTTGQITIKQAVDYEERSSYSFEVFASDSGEARLT 5364
Query: 574 GS 579
GS
Sbjct: 5365 GS 5366
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GT +T+VY+ D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 5395 NVAIGTTVTQVYASDLDSSLNGKVLFSILEGNSDGKFVIDQNTGVVTTNKSLDYEDVTEY 5454
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 5455 TLVIQATDCGDPPLNSS 5471
Score = 32.7 bits (71), Expect = 0.33
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +1
Query: 274 LVLTSSQQPPGFHLPA-IMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGAS 450
L+ + PP F LP + + N + ++ ++ + SD + Y
Sbjct: 1323 LIEDENDNPPVFDLPYYFVRMYENVSIRADIIR---VHASDSDSGFNSEIRYSFPVGFVV 1379
Query: 451 VPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIP 564
PF IN TG++ + +E R Y V A D IP
Sbjct: 1380 KPFAINANTGMIYTRHEIDFEEKRVYEFSVIASDQGIP 1417
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRV--YSDKTGTEAVTYGLEADGASVPFEINPQTGV 483
H P ++ N +P N GT I RV D A + D AS + QTG
Sbjct: 2389 HAPRFLNEFYNASIPENLPLGTSIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVNQTGD 2448
Query: 484 VTVNDTLIDKENRSYSLWVTAMDGSIPQ 567
+T+ L + R Y V A D P+
Sbjct: 2449 ITLARELDYETRRRYEFEVFARDDGTPE 2476
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GT +T+V + D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 4084 NVAIGTTVTQVTASDLDSSLNGKVLFSILEGNSDGKFVIDQNTGVVTTNKSLDYEDVTEY 4143
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 4144 TLVIQATDCGDPPLNSS 4160
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GT +T+V + D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 4521 NVAIGTTVTQVTASDLDSSLNGKVLFSILEGNSDGKFVIDQNTGVVTTNKSLDYEDVTKY 4580
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 4581 TLVIQATDCGDPPLNSS 4597
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GT +T++ + D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 4958 NVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKFSIDQNTGVVTTNKSLDYEDVTEY 5017
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 5018 TLVIQATDCGDPPLNSS 5034
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
+P N G+ I R + ++ Y + ++ F ++P TGV+ + L + Y
Sbjct: 3000 IPENITVGSVILRTVA--LDLDSAVYSILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEY 3057
Query: 529 SLWVTAMDGSIP 564
+L +T D P
Sbjct: 3058 TLTITVHDSGDP 3069
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 358 NTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSY 528
N GT +T++ + D + V + + + F I+ TGVVT N +L ++ Y
Sbjct: 3210 NVAIGTTVTQMTASDLDSSLNGNVLFSILEGNSDGKFLIDQNTGVVTTNKSLDYEDVTKY 3269
Query: 529 SLWVTAMDGSIPQRTGS 579
+L + A D P S
Sbjct: 3270 TLVIQATDCGDPPLNSS 3286
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DK---TGTEAVTYGLEADGASVP--FEINPQTGVVTVNDTLID 510
+ NT+ G I RV + D+ + V Y L+ F IN QTG + + +L
Sbjct: 5499 IDENTMVGHVILRVQATDRDHVNSSSIVIYSLDQSDTEAMRYFTINNQTGELILVSSLDY 5558
Query: 511 KENRSYSLWVTAMDGSIPQRT 573
+ + Y V A+D ++ R+
Sbjct: 5559 ESTKRYQFTVFALDNAMRSRS 5579
>SB_56770| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1136
Score = 37.1 bits (82), Expect = 0.015
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKT--GTEAVTYGLEADGASVPFEINPQTGVVT 489
P E V T +P+ RV++ T G Y + +S F +NP TGVV
Sbjct: 232 PKFEKEEYTAMVMEETQLNSPVARVHAKDTDQGMSGSVYYYLSPLSSY-FTVNPITGVVI 290
Query: 490 VNDTLIDKENRSYSLWVTAMDGSIPQRTGSVR 585
+ TL ++ SY L V A D P+R + +
Sbjct: 291 LVGTLDYQKQSSYQLTVMATDRGSPRREAATK 322
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 403 TGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTA 546
TG A+TY + + F I+ TG + VN L + +SY L V A
Sbjct: 1007 TGPAAITYSIVGGNKNDAFRIDRTTGQIAVNKPLDYEVLQSYVLNVRA 1054
>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3610
Score = 37.1 bits (82), Expect = 0.015
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 262 VAGCLVLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYS--DKTGTEAV-TYGL 432
++G VL + H P + V +T G +TRV + + TG + Y +
Sbjct: 2071 LSGTTVLQVFFEDENDHKPKFVRQYYYASVSESTRTGVAVTRVEATDEDTGYNGMMNYFI 2130
Query: 433 EADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQ 567
F I P+TGVV V+ L + +SY L V D +PQ
Sbjct: 2131 VQGNEPYAFFIEPRTGVVRVSGILDFESKKSYELIVMVSDMGMPQ 2175
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 403 TGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTA 546
TG A+TY + + F I+ TG + VN L + +SY L V A
Sbjct: 238 TGPAAITYSIVGGNKNDAFRIDRTTGQIAVNKPLDYEVLQSYVLNVRA 285
>SB_47886| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 679
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDG 555
I+ D A+TY + A F IN +TG ++V L D+E R Y+L V A DG
Sbjct: 151 ISATDGDAGANSALTYSIAAGNEEGVFSINNKTGAISVAKQL-DRETRDQYTLTVMAQDG 209
Query: 556 SIP 564
P
Sbjct: 210 GEP 212
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 422 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGSNSALTYSIAAGNEEGF 479
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 480 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 515
Score = 36.7 bits (81), Expect = 0.020
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
+L + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 26 ILDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 83
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 84 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 119
Score = 36.3 bits (80), Expect = 0.027
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T + D A+TY + A
Sbjct: 553 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VLATDGDAGANSALTYSIAAGNEEGF 610
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 611 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 646
>SB_34938| Best HMM Match : Cadherin (HMM E-Value=1e-25)
Length = 150
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 46 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 103
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 104 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 139
>SB_28202| Best HMM Match : Cadherin (HMM E-Value=1.8e-29)
Length = 242
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 116 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 173
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 174 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 209
>SB_24627| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 262
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 26 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 83
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 84 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 119
>SB_18765| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 389
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 153 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 210
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 211 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 246
>SB_15712| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1075
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY + A
Sbjct: 839 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAAGNEEGF 896
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 897 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 932
Score = 35.5 bits (78), Expect = 0.046
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVP 456
VL + + P F P+ +V N T+ T ++ D A+TY +
Sbjct: 347 VLDINDETPLFQSPSF-NVSVNEIERLGTVFLT-VSATDGDAGANSALTYSIAVGNEEGF 404
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 405 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 440
>SB_36047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 370 GTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR-SYSLW 537
GT I V++ D +TY + A F IN +TG ++V L D+E R Y+L
Sbjct: 464 GTVILTVFATDGDAGANGTLTYSISAGNEEGFFSINNKTGAISVAKQL-DRETRDQYTLT 522
Query: 538 VTAMDGSIP 564
V A DG P
Sbjct: 523 VMAQDGGEP 531
>SB_21336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
D A+TY + F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 32 DAGANSALTYSIAVGNEEGFFSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 87
>SB_44524| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 630
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 385 RVYSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMD 552
R+ D A VTY L F INP++GV+T+ L + ++YS+ V A+D
Sbjct: 381 RIKGDVEDNHARVTYELSPIALRDVFAINPKSGVITLRKPLDYETRKTYSIKVIALD 437
>SB_32317| Best HMM Match : Cadherin (HMM E-Value=1.5e-28)
Length = 331
Score = 33.9 bits (74), Expect = 0.14
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
V N+ GTP+ RV++ D+ +TY L F IN TG +TV + +
Sbjct: 116 VLENSPTGTPVLRVHASDRDQGANGKITYKLTNGNKDDAFSINNVTGEITVAGVIDREAV 175
Query: 520 RSYSLWVTAMDGSIPQRTG-------SVRNNHRQLRSPTQNTSTTNILTSVSTLRQRGLY 678
++ L V A D P +V++ + + P +TS+ T+V Q LY
Sbjct: 176 HTFVLTVQAEDQGEPSSRKTFAEVVITVKDENIEFLQPGGSTSSRAAATAVEL--QFALY 233
Query: 679 NQRY 690
Y
Sbjct: 234 ESYY 237
>SB_57964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 358 NTLKGTPITRVYSDKTGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSL 534
+TL+ + G A + Y L+ S F +N TG +T+ + +E SYS
Sbjct: 2 STLEDPLLLNARDKDEGVNAEIRYFLKDAIVSKRFSMNDTTGQITIKQAVDYEERSSYSF 61
Query: 535 WVTAMDGSIPQRTGS 579
V A DG + TGS
Sbjct: 62 EVFASDGGEARLTGS 76
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -3
Query: 278 TRHPATVSHTPIDMITVIV*PPESVSLACVASFVRAATRYTCTVCLSYTCTLHFLYTS-- 105
T + +T S+TP T + S C S+ + T YTCT SYT T + T+
Sbjct: 177 TSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYT-STTSYTCTT--SYTSTTSYTPTTSY 233
Query: 104 TRFKSFILQSNYRPS 60
T S+ +Y P+
Sbjct: 234 TSTTSYTSNPSYTPT 248
>SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08)
Length = 857
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 463 INPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTSTTNIL 642
+ P TGV++ NDT+ ++N + V M S+ + GS+R HR S + ++S +
Sbjct: 167 LQPSTGVLSDNDTIERRDNTDSGIVVFKMP-SVSE--GSIRTRHRNSTSSSSSSSGEDTA 223
Query: 643 TS 648
T+
Sbjct: 224 TA 225
>SB_4130| Best HMM Match : Cadherin (HMM E-Value=9.3e-29)
Length = 322
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 370 GTPITRVYS-DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTA 546
GT +T V + D +T+ L + F +NP TGVVTV++ + + + +Y++ +T
Sbjct: 121 GTRVTMVTATDGDSAANLTFSLARQDTEL-FAVNPLTGVVTVSNAALLRRD-TYTIKLTV 178
Query: 547 MDGS 558
DG+
Sbjct: 179 SDGN 182
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 367 KGTPITRVYSDKT-GTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVT 543
KG+ + V +D+ + +TY + A F I+P TG +T L + Y+ +
Sbjct: 17 KGSQLVAVATDQDISGDKLTYEIVETSARDVFSIHPATGAITTAKVLDYEVTPQYAFKIK 76
Query: 544 AMDGSIPQ 567
D P+
Sbjct: 77 VTDSGNPR 84
>SB_50345| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1021
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 340 NWFVPSNTLKGTPITR-VYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKE 516
N+ + N+ GT + R V + + + V++ + G F IN TGV+ L +
Sbjct: 573 NFSIVENSPLGTIVGRIVVNTRAPGKVVSFSVITTGRQ-DFMINNATGVIRTTRRLDREA 631
Query: 517 NRSYSLWVTAMDGSIPQRTGSVRN 588
+Y L V DG + R S+ N
Sbjct: 632 VAAYDLVVLVTDGDVEMRLASIVN 655
>SB_28228| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 838
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 DKTGTEAVTYGL---EADGASVPFEINPQTGVVTVNDTLIDKENRS-YSLWVTAMDGSIP 564
DK VTY + E + F I+P TGV+T TL D+E+ S + L + A D +P
Sbjct: 26 DKGANARVTYSIINFEDSRSDNLFSIHPFTGVLTALSTL-DREDLSRHILTIQAKDTGVP 84
Query: 565 QRTG 576
+ +G
Sbjct: 85 RMSG 88
>SB_18678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 394 SDKTGTEAVTYGL--EADGASVPFEINPQTGVVTVNDTLIDKEN-RSYSLWVTAMDGS-I 561
SD V+Y + +A+G F+IN + G +T + L D+EN ++ L VTA DG+ +
Sbjct: 445 SDIGSNAMVSYAVLSDAEGHYQYFKINAKNGTITTSRRL-DRENITTFRLRVTASDGAPL 503
Query: 562 PQRTGSVRNNH 594
+G ++ NH
Sbjct: 504 STISGLLQLNH 514
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYSDKT--GTEAVTYGLEADGASVPFEINPQTGV 483
++P N V N GT + +V ++ G A ++ E AS F I +G+
Sbjct: 310 NIPLFTLPSYNTTVNENAAIGTYVIQVQAEDIDQGVNA-SFIYEIAYASHEFVIGEHSGI 368
Query: 484 VTVNDTLIDKENRSYSLWVTAMD 552
+ VN TL ++ YS+ V A +
Sbjct: 369 IIVNGTLDREKKDFYSITVIARE 391
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 397 DKTGTEAVTYGL---EADGASVPFEINPQTGVVTVNDTLIDKENRS-YSLWVTAMDGSIP 564
DK VTY + E + F I+P TGV+T TL D+E+ S + L + A D +P
Sbjct: 47 DKGANARVTYSIINFEDSRSDNLFSIHPFTGVLTALSTL-DREDLSRHILTIQAKDTGVP 105
Query: 565 QRTG 576
+ +G
Sbjct: 106 RMSG 109
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 373 TPITRVYSDKTGTEA---VTYGLEAD-GASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
T + +V++D T A V Y +E GA F I+ +TG+VT + +E Y + +
Sbjct: 955 TFVMQVHADDQDTGANGEVIYSIEKPPGALSYFAIDDKTGIVTTLQSFDREEKPVYQIRI 1014
Query: 541 TAMDGSIPQRTGSVR 585
DG + G+ R
Sbjct: 1015 IGRDGGLGSSRGAER 1029
>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3889
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDG 555
D+ A+TY + G F IN TG VT+ L + ++YS V A DG
Sbjct: 2392 DQGSNAAITYSMSYPG----FAINSNTGSVTITRPLDRETKQAYSFTVHARDG 2440
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 442 GASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
G+ FEI GVV V+ +L + Y L V+A+DGS R G
Sbjct: 2302 GSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREG 2346
Score = 31.1 bits (67), Expect = 1.00
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGTEA---VTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
VP N G + +V + E VTY + GA F IN TGV+ L +
Sbjct: 3296 VPENAAAGEFVVQVNATDADVERNGHVTYTI-MHGALGMFTINETTGVIRTQGVLNRESK 3354
Query: 520 RSYSLWVTAMD-GSIP 564
Y+L V A D G++P
Sbjct: 3355 DFYTLIVMARDQGAVP 3370
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 457 FEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSVR 585
F ++P TG++ L ++ SY+L + A D +P + + R
Sbjct: 2008 FTLDPNTGMIKTARNLERQQTFSYNLTIGAADHGLPSFSATTR 2050
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYSDKTGT---EAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+ + L G+ + +V + T +TY + + F IN TG+++VN L +
Sbjct: 3785 ISESALNGSSVIQVAATDADTGINSRLTYRIISGDEQGHFAINASTGLISVNSALDRESI 3844
Query: 520 RSYSLWVTAMDGSIPQRTGSVRNNHRQL 603
S+ L V A + + R R +
Sbjct: 3845 DSFRLTVGAFNDEALAFNNTSRREQRNV 3872
>SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 463 INPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTSTTNIL 642
+N Q VV T+ + E W SIP++ +V ++ +QL++ TQ TN++
Sbjct: 797 VNAQDAVVVGQKTMKEFEKA----WPEGFRNSIPKKVKTVSDSKKQLKAGTQKVYDTNVI 852
Query: 643 TS 648
S
Sbjct: 853 YS 854
>SB_41246| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 660
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDG 555
D+ A+TY + G F IN TG VT+ L + ++YS V A DG
Sbjct: 425 DQGSNAAITYSMSYPG----FAINSNTGSVTITRPLDRETKQAYSFTVHARDG 473
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
D + +TY L + F ++P TG++ L ++ SY+L + A D +P +
Sbjct: 21 DAGENKRLTYELISGNTGGDFTLDPNTGMIKTARNLERQQTFSYNLTIGAADHGLPSFSA 80
Query: 577 SVR 585
+ R
Sbjct: 81 TTR 83
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 442 GASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
G+ FEI GVV V+ +L + Y L V+A+DGS R G
Sbjct: 335 GSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREG 379
>SB_48962| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2225
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 370 GTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
GTP+ + D + A+TY + F IN TGV+ V+ + E +SY+ +V
Sbjct: 705 GTPVLMTSASDPDASSNAALTYVIVGHQTPPVFTINAATGVIQVSR---EPEVKSYNFFV 761
Query: 541 TAMDGSIP 564
DG P
Sbjct: 762 LVKDGGNP 769
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 385 RVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIP 564
R S ++ + +TY + S F I+ + G + VN L + + Y+L V A D P
Sbjct: 1193 RAVSRESSNDVITYAILRGADSGLFSIDRKNGTIHVNRKLDYETTKLYTLTVEASDAGPP 1252
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 412 EAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDG 555
+ +TY + + F I+ G +TV +L +E YSL V A DG
Sbjct: 95 DQITYNIASGNHGNKFTIDRYGGFITVAHSLDREEKSFYSLRVEATDG 142
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 370 GTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
G +TR+ + D+ + + Y + F+I+ Q+GV+T++ + K+ + Y L V
Sbjct: 498 GQFVTRILATDPDEGDAKKLRYSITGGQGRQHFQIDSQSGVITLSRVVGIKQGKVYGLDV 557
Query: 541 TAMDGSIPQRTGSVR 585
D S+ T VR
Sbjct: 558 EVSD-SVHVSTSKVR 571
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 430 LEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTGSV 582
L +DG + F I +G VTV L ++ +Y+L V A D P R+ +V
Sbjct: 389 LNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATV 439
Score = 27.9 bits (59), Expect = 9.3
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 310 HLPAIMHVERNWFVPSNTLKGTPITRVYS-DK-TGTEA-VTYGLEADGASVP-FEINPQT 477
H P + V + GT + V + D+ TG+ A ++Y + VP F ++ T
Sbjct: 760 HAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI---ATLVPEFSVDETT 816
Query: 478 GVVTVNDTLIDKENRSYSLWVTAMDGSIPQ 567
GV+ +L ++ +Y VTA D IPQ
Sbjct: 817 GVIKTAGSLDREKVDTYRFEVTATDHGIPQ 846
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+ N LKG I V + D+ V Y + G F IN +TG V +L +
Sbjct: 1495 IQENLLKGQLIATVTATDRDQGRNGEVEYKIVPVGGQDFFTINNKTGEVITTSSLDRETK 1554
Query: 520 RSYSLWVTAMDG 555
+Y++ +TA DG
Sbjct: 1555 ATYTVIITAEDG 1566
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T D + Y + A F++ G++ V +L S+ L + A D
Sbjct: 707 VTATDLDTANNGRIRYSIVAGNQEGAFQVLTDNGLIRVAKSLTTVAASSFLLTLEAADSG 766
Query: 559 IPQRTGSV 582
P+R GSV
Sbjct: 767 DPERKGSV 774
>SB_26949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGSIPQRTG 576
DK+ + + +G+ F +N + GV+ +N +L +E + Y+L V+ D P+R
Sbjct: 2 DKSNAQ-LNFGITEGNVKNTFYVNTE-GVIYLNRSLDFEERKVYNLSVSVEDSGTPKRKA 59
Query: 577 SVRNN 591
+ N
Sbjct: 60 VIEAN 64
>SB_55751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -3
Query: 554 PSIAVTHREYERFSLS--IKVSLTVTTPV*GLISNGTDAPSASRPYVTASVPVLSLYTRV 381
PS+ H Y L+ ++T TTP + T P+A+ P +TA+ +++L T +
Sbjct: 16 PSLPYPHHPYYHHCLTPMAPTTITATTPATIAATTITTFPTATNPPITAANRMITLLT-I 74
Query: 380 MGVPFKVLEGTNQFLST 330
++ T ++T
Sbjct: 75 AATTADIIAATTPLITT 91
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN---RSYSLWVTAMDGSIPQ 567
D G V Y L A+ VPFEI P TG++ T +D++ +L V A D P
Sbjct: 1665 DSGGNGKVRYSL-ANLRPVPFEIEPDTGIIRTT-TNLDRDTGLPEFINLQVRASDFGTPL 1722
Query: 568 R 570
R
Sbjct: 1723 R 1723
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 373 TPITRVYS-DK-TGTEA-VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVT 543
TP+ RV + DK G+ + Y + FEIN +TG + L + + + L V
Sbjct: 1547 TPVLRVLATDKDAGSNGNIMYVITRGNELGKFEINSKTGQIYTKGDLDYESRQRFDLTVA 1606
Query: 544 AMDG 555
A+DG
Sbjct: 1607 ALDG 1610
>SB_41625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 730 VVLQFGSFLWW*KGIFGCKGHVGVRWKRK*GYWWLRYFGSD 608
VV + G +LW+ +G GC VG+ G WWL Y D
Sbjct: 175 VVYERGWWLWYTRGDGGCGIRVGMVAVVYEGGWWLWYTRGD 215
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 730 VVLQFGSFLWW*KGIFGC---KGHVGVRWKRK*GYWWLRYFGSDS*VVGDYCEHFLCAVV 560
VV + G +LW+ +G GC +G V V ++R WWL Y D G + AVV
Sbjct: 227 VVYESGWWLWYTRGDGGCGIREGMVAVVYERG---WWLWYTRGDG---GCGIREGMVAVV 280
Query: 559 WSR 551
+ R
Sbjct: 281 YER 283
>SB_51258| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 484
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 457 FEINPQTGVVTVNDTLIDKENR-SYSLWVTAMDGSIP 564
F IN +TG ++V L D+E R Y+L V A DG P
Sbjct: 3 FSINNKTGAISVAKQL-DRETRDQYTLTVMAQDGGEP 38
>SB_766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 361 TLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
T G I + S T A+ +AD + +P + Q VVT + L + SL
Sbjct: 765 TSTGIQIAEMGSFSTHVPAILTEGDADESEIPSTLTEQFHVVTTSSALASQTTAGESLGA 824
Query: 541 TAMDGSIPQRTGSVRNNHRQL 603
G + + G V +H+Q+
Sbjct: 825 MMQGGELGR--GMVLTDHQQV 843
>SB_56813| Best HMM Match : Cadherin (HMM E-Value=5.8e-40)
Length = 211
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 418 VTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRS-YSLWVTAMDG 555
V+Y + + FE+N + G + + TL D+EN Y L +TA DG
Sbjct: 56 VSYYISEGNINGAFEVNREFGTIRLAGTL-DRENVDHYKLTLTAKDG 101
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 558 HTTAHRKCSQ*SPTTQESDPKYLNHQYPHFRFHLTPTWPLQPKIPFHHHKK 710
HTT+H +Q + T + P + QY H H T T P+ +P H+ +
Sbjct: 1037 HTTSHSTITQNAITQPVTVPSHNQSQYHHTISHSTITQPV--TVPSHNQSQ 1085
>SB_9756| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 608
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 379 ITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
+T D AV Y + F +N GV+T+ +L + N +++L +TA D
Sbjct: 192 VTSTDQDIGKNAAVRYAIVDGDPDGYFAVNDY-GVITLTKSLDSERNTTFNLTITAHDKG 250
Query: 559 IPQRTGSVR 585
+P + R
Sbjct: 251 MPSLETATR 259
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 529 SLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTSTTN 636
S W+ ++ +P+ + N R LRS QNTS +N
Sbjct: 97 SKWLPELNHHMPETPKILVGNKRDLRSAQQNTSLSN 132
>SB_46185| Best HMM Match : Flt3_lig (HMM E-Value=3.3)
Length = 292
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 303 WRLL*RC-QNKTSRYREPYSHRHDHSNRL-TAGVSVLGLRRF 184
WRL+ RC QN T+R REP H + RL T +S+ RF
Sbjct: 104 WRLM-RCGQNYTTRLREPEVECHAYCKRLYTEALSLSDRFRF 144
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 457 FEINPQTGVVTVNDTLIDKENRSYSLWVTAMDG 555
F+I+ TG++T TL + Y + VTA DG
Sbjct: 147 FQIDASTGMITTKTTLDREVTPKYDVEVTAKDG 179
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = -3
Query: 278 TRHPATVSHTPIDMITVIV*PPESVSLACVASFVRAA-----TRYTCTVCLSYTCTLHFL 114
T + T S+TP T + S S+ T YTCT SYTCT +
Sbjct: 114 TSYTPTTSYTPTTSYTCTTSYTSTTSYTPTTSYTPTTSYTLTTSYTCTT--SYTCTTSYT 171
Query: 113 YTST 102
+T++
Sbjct: 172 HTTS 175
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 223 TITV-IMSMGVWLTVAGCLVLTSSQQPPGFHL 315
TI V +M+M W+ V GCL L + P G L
Sbjct: 116 TIPVWLMTMACWIFVTGCLSLVNYYSPYGHRL 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,316,428
Number of Sequences: 59808
Number of extensions: 637216
Number of successful extensions: 2056
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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