Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0119
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 44 1e-04
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 35 0.054
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 35 0.054
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 30 2.0
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 29 3.5
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 29 3.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 4.7
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 6.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 6.2
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 28 8.1
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 28 8.1
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 28 8.1
AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic s... 28 8.1
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 28 8.1
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 28 8.1
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 277 VLTSSQQPPGFHLPAIMHVERNWFVPSNTLKGTPITRVY-SDKTGTEAVTYGLEADGASV 453
VL P F I HVE VP + G P+ ++ SD + L+ G +
Sbjct: 2136 VLDEDDNAPRFS--RIFHVE----VPEDVRIGEPVIQLSASDADEHSNHRFELDGGGEGI 2189
Query: 454 PFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS 558
PF ++ TG+V VND+L ++ +SY + V DG+
Sbjct: 2190 PFRVDENTGMVFVNDSLDFEKKQSYRIKVKLTDGA 2224
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS-DKTGTEAVTYGLEA-DGASVPFEINPQTGVVTVNDTLIDKENR 522
+ N+ G+ I R+ + DK + Y LE+ D ++PF IN TG +TV + +EN
Sbjct: 1765 ISENSKIGSKIIRILATDKDKDAELQYSLESNDEITIPFRINVATGWITVAGKVNREENE 1824
Query: 523 SYSLWVTAMDG 555
+ +V DG
Sbjct: 1825 EFRFFVKVTDG 1835
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 35.1 bits (77), Expect = 0.054
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +1
Query: 178 TNEATQAKDTDSGGQTITVIMSM--GVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFV 351
T E T + D+ IT ++ G ++ + LT + H P ++ ++ +
Sbjct: 429 TGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITL 488
Query: 352 PSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR 522
N G + RVY+ D + Y +E S F I+ +G++ L+D+E
Sbjct: 489 EENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG---SEDFIIDEDSGLIKTTK-LLDRETT 544
Query: 523 S-YSLWVTAMDGSIP 564
+ YSL VTA D P
Sbjct: 545 ARYSLKVTARDMGTP 559
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P ++ G P+ + + D+ + Y +++ S F I+P +G ++V+ L ++
Sbjct: 691 IPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS---SQFFRIDPSSGDISVSSDLDREDR 747
Query: 520 RSYSLWVTAMDGSIP 564
++S+ VTA D + P
Sbjct: 748 ATFSVIVTASDHASP 762
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 35.1 bits (77), Expect = 0.054
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +1
Query: 178 TNEATQAKDTDSGGQTITVIMSM--GVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFV 351
T E T + D+ IT ++ G ++ + LT + H P ++ ++ +
Sbjct: 429 TGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITL 488
Query: 352 PSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR 522
N G + RVY+ D + Y +E S F I+ +G++ L+D+E
Sbjct: 489 EENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG---SEDFIIDEDSGLIKTTK-LLDRETT 544
Query: 523 S-YSLWVTAMDGSIP 564
+ YSL VTA D P
Sbjct: 545 ARYSLKVTARDMGTP 559
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P ++ G P+ + + D+ + Y +++ S F I+P +G ++V+ L ++
Sbjct: 691 IPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS---SQFFRIDPSSGDISVSSDLDREDR 747
Query: 520 RSYSLWVTAMDGSIP 564
++S+ VTA D + P
Sbjct: 748 ATFSVIVTASDHASP 762
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 35.1 bits (77), Expect = 0.054
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +1
Query: 178 TNEATQAKDTDSGGQTITVIMSM--GVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWFV 351
T E T + D+ IT ++ G ++ + LT + H P ++ ++ +
Sbjct: 429 TGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITL 488
Query: 352 PSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENR 522
N G + RVY+ D + Y +E S F I+ +G++ L+D+E
Sbjct: 489 EENVAIGEEVGRVYAIDEDSGPNGIIKYSMEG---SEDFIIDEDSGLIKTTK-LLDRETT 544
Query: 523 S-YSLWVTAMDGSIP 564
+ YSL VTA D P
Sbjct: 545 ARYSLKVTARDMGTP 559
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 VPSNTLKGTPITRVYS---DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKEN 519
+P ++ G P+ + + D+ + Y +++ S F I+P +G ++V+ L ++
Sbjct: 691 IPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS---SQFFRIDPSSGDISVSSDLDREDR 747
Query: 520 RSYSLWVTAMDGSIP 564
++S+ VTA D + P
Sbjct: 748 ATFSVIVTASDHASP 762
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 421 TYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
+Y L A + + + NP+TG VTV T I E ++L+V
Sbjct: 293 SYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAIYFALYV 332
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 421 TYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWV 540
+Y L A + + + NP+TG VTV T I E ++L+V
Sbjct: 293 SYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAIYFALYV 332
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -2
Query: 384 GDGRTLQSVGGHEPVPLHVHNRRQVEAWRLL*RCQNKTSR---YREPYSHRHDHSNRLTA 214
GDGRT + EPV NR + E+ + Q++T +R Y+++ + NR +
Sbjct: 207 GDGRTSNNTSLQEPVIQDTRNRNRSESSSTM-SSQSRTEHAPIFRLQYNYQREADNRSSR 265
Query: 213 GVSVLG 196
V + G
Sbjct: 266 LVQIQG 271
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = -3
Query: 464 ISNGTDAPSASRPYVTAS---VPVLSLYTRVMGVPFKVLEGTNQFLST 330
ISN +++ +AS Y+ + +PVL++Y PF V + +NQ ++T
Sbjct: 112 ISNYSESNNASMIYLNSMHKYIPVLTIYESPSESPFCVPQSSNQIVAT 159
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = -3
Query: 464 ISNGTDAPSASRPYVTAS---VPVLSLYTRVMGVPFKVLEGTNQFLST 330
ISN +++ +AS Y+ + +PVL++Y PF V + +NQ ++T
Sbjct: 112 ISNYSESNNASMIYLNSMHKYIPVLTIYESPSESPFCVPQSSNQIVAT 159
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/108 (23%), Positives = 41/108 (37%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVN 495
P + ER V S T T +TR Y+D+ E G + S E V T
Sbjct: 2816 PVLSEKEREHQVTSETTTTTTVTREYNDEPEDEQEHQGPHSPAPSSHTEAEHPHIVETTT 2875
Query: 496 DTLIDKENRSYSLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTSTTNI 639
T + +E + ++ + ++H Q T+ T+TT +
Sbjct: 2876 TTTVTRE---FQEEPEELEYKQEDNSRKSPSSHSQENLVTETTTTTTV 2920
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTL-IDKENRS-YSLWVTAMDGSIPQR 570
D + + +E F I+ +G +T + +D+E +S + LWV+ DG PQ
Sbjct: 1092 DNDAAAPLMFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQL 1151
Query: 571 TGSV 582
+V
Sbjct: 1152 CSNV 1155
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTL-IDKENRS-YSLWVTAMDGSIPQR 570
D + + +E F I+ +G +T + +D+E +S + LWV+ DG PQ
Sbjct: 1092 DNDAAAPLMFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQL 1151
Query: 571 TGSV 582
+V
Sbjct: 1152 CSNV 1155
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 397 DKTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTL-IDKENRS-YSLWVTAMDGSIPQR 570
D + + +E F I+ +G +T + +D+E +S + LWV+ DG PQ
Sbjct: 1092 DNDAAAPLMFKIERGDPQSFFRIDLTSGYITTSGIRRLDREKQSEHELWVSICDGGEPQL 1151
Query: 571 TGSV 582
+V
Sbjct: 1152 CSNV 1155
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/108 (23%), Positives = 42/108 (38%)
Frame = +1
Query: 316 PAIMHVERNWFVPSNTLKGTPITRVYSDKTGTEAVTYGLEADGASVPFEINPQTGVVTVN 495
P + ER+ V S T T +TR Y+D+ E G + S E V T
Sbjct: 2816 PVLSEKERDDQVTSETTTTTTVTREYNDEPEDEQEHQGPHSPAPSSHTEAEHPHIVETTT 2875
Query: 496 DTLIDKENRSYSLWVTAMDGSIPQRTGSVRNNHRQLRSPTQNTSTTNI 639
T + +E + ++ + ++H Q T+ T+TT +
Sbjct: 2876 TTTVTRE---FQEEPEELEYKQEDNSRKSPSSHSQENLVTETTTTTTV 2920
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 583 RNNHRQLRSPTQNTSTTNILTSVSTLRQ 666
+NNHRQ+ +P+Q TS++ LT+V+ R+
Sbjct: 563 KNNHRQVPAPSQVTSSS--LTNVTNSRK 588
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 583 RNNHRQLRSPTQNTSTTNILTSVSTLRQ 666
+NNHRQ+ +P+Q TS++ LT+V+ R+
Sbjct: 604 KNNHRQVPAPSQVTSSS--LTNVTNSRK 629
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 247 GVWLTVAGCLVLTSSQQPPGFHLPAIMHVERNWF-----VPSNTLKGTPITRVYSDKTGT 411
G WLTV L++T+S F + A++ + + V L G + RV +D T
Sbjct: 7 GTWLTVMEKLLVTASATAATFAVFAVLFTVPSLYNTINEVHDQVLDGVSVFRVETDSAWT 66
Query: 412 EAVTYGLEADGASVPFEINP 471
E + + + P +NP
Sbjct: 67 EMMDIQITVTPPTKP-RVNP 85
>AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 554
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 583 RNNHRQLRSPTQNTSTTNILTSVSTLRQ 666
+NNHRQ+ +P+Q TS++ LT+V+ R+
Sbjct: 492 KNNHRQVPAPSQVTSSS--LTNVTNSRK 517
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 583 RNNHRQLRSPTQNTSTTNILTSVSTLRQ 666
+NNHRQ+ +P+Q TS++ LT+V+ R+
Sbjct: 604 KNNHRQVPAPSQVTSSS--LTNVTNSRK 629
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 400 KTGTEAVTYGLEADGASVPFEINPQTGVVTVNDTLIDKENRSYSLWVTAMDGS-----IP 564
K GT A + E D AS+ E+N + ++ T D EN SL +D + IP
Sbjct: 474 KLGTPACDFLFELD-ASMIQEVNRMSSRISRIRTKNDFENVK-SLVNAVLDSTKSLKTIP 531
Query: 565 QRTGSVRNNHRQLRSPTQ 618
G+ N+ R+ RSPT+
Sbjct: 532 NLNGNSSNSTRRRRSPTK 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,845,268
Number of Sequences: 27780
Number of extensions: 446655
Number of successful extensions: 1371
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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