Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0115
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    38   0.16 
UniRef50_A4J309 Cluster: Putative uncharacterized protein precur...    33   4.5  
UniRef50_Q17DK7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_A7SJJ0 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.9  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   5.9  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +1

Query: 424 QAGWWYLPTRTHKRSCHQ*LC 486
           +A WWYLP RTHKRS H+  C
Sbjct: 568 RAEWWYLPARTHKRSYHRYQC 588


>UniRef50_A4J309 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 131

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +3

Query: 375 GCPTLQTETHYCFTAETGRVVVPTHADSQEVLPPVIMQIITLVLNYNYFPLLVI*KKLMG 554
           G PT+ +E    FT + GR+V   + D++E+ P + + I+T+   ++ F        L  
Sbjct: 52  GLPTVTSEE---FTDKIGRIVAAIYKDAKEISPMLTLGIVTVCAVFSIFFKAARIMILWS 108

Query: 555 VNKISLITW 581
           V  + LI W
Sbjct: 109 VASMLLILW 117


>UniRef50_Q17DK7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 762

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 378 CPTLQTETHYCFTAETGRVVVPTHADSQEVLPPVIMQIITLVLNYNYFPLLV 533
           C  +  E    F   T +++V    + QE  PP   QI+T   N  YFP ++
Sbjct: 395 CLEIDAENKLLFVGTTHKLLVLKQVE-QEAKPPEFQQIMTFTHNLKYFPTMI 445


>UniRef50_A7SJJ0 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 4037

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 47   MENPVFHVFCIDFGSTESVKIDKYV 121
            +E+P FHV  +DFG+TE + +D+ V
Sbjct: 1941 VEDPTFHVRYVDFGNTECLPVDRLV 1965


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 395 RNALLLHGRNRQGGGTYPRGLTRGPATSNYANYNF 499
           RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 114 RNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,046,271
Number of Sequences: 1657284
Number of extensions: 12223898
Number of successful extensions: 28022
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28017
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)