Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0115
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075502-1|AAL68311.1|  431|Drosophila melanogaster RE52190p pro...    29   7.1  
AE014298-1412|AAF46555.2|  431|Drosophila melanogaster CG34104-P...    29   7.1  
AE014298-1411|ABI30973.1|  582|Drosophila melanogaster CG34104-P...    29   7.1  
AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p pro...    28   9.4  
AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-P...    28   9.4  
AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-P...    28   9.4  

>AY075502-1|AAL68311.1|  431|Drosophila melanogaster RE52190p
           protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 312 LPRKYATHLEI*VLRSQYSYNGCPTLQTETHYCFTAETGRVVVPTHADSQ 461
           L ++Y  HL+   +   Y     PT Q+ + +CF  +TG V++P  A  Q
Sbjct: 171 LSQQYNQHLQSPHIGYPYGSPPSPTAQS-SDFCFDRQTGLVMLPGTAGGQ 219


>AE014298-1412|AAF46555.2|  431|Drosophila melanogaster CG34104-PA,
           isoform A protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 312 LPRKYATHLEI*VLRSQYSYNGCPTLQTETHYCFTAETGRVVVPTHADSQ 461
           L ++Y  HL+   +   Y     PT Q+ + +CF  +TG V++P  A  Q
Sbjct: 171 LSQQYNQHLQSPHIGYPYGSPPSPTAQS-SDFCFDRQTGLVMLPGTAGGQ 219


>AE014298-1411|ABI30973.1|  582|Drosophila melanogaster CG34104-PB,
           isoform B protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 312 LPRKYATHLEI*VLRSQYSYNGCPTLQTETHYCFTAETGRVVVPTHADSQ 461
           L ++Y  HL+   +   Y     PT Q+ + +CF  +TG V++P  A  Q
Sbjct: 171 LSQQYNQHLQSPHIGYPYGSPPSPTAQS-SDFCFDRQTGLVMLPGTAGGQ 219


>AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p protein.
          Length = 1353

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +2

Query: 410  LHGRNRQGGG-TYPRGLTRGPATSNYANYNFGFKL*LF-SIACYMKE--THGSK*NKFDY 577
            L GR  + G  T+PRGL  GP  S     +   ++ +F S   ++KE   +G+   +FD 
Sbjct: 1081 LGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDC 1140

Query: 578  LAG 586
            LAG
Sbjct: 1141 LAG 1143


>AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-PB,
            isoform B protein.
          Length = 1353

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +2

Query: 410  LHGRNRQGGG-TYPRGLTRGPATSNYANYNFGFKL*LF-SIACYMKE--THGSK*NKFDY 577
            L GR  + G  T+PRGL  GP  S     +   ++ +F S   ++KE   +G+   +FD 
Sbjct: 1081 LGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDC 1140

Query: 578  LAG 586
            LAG
Sbjct: 1141 LAG 1143


>AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-PA,
            isoform A protein.
          Length = 1353

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +2

Query: 410  LHGRNRQGGG-TYPRGLTRGPATSNYANYNFGFKL*LF-SIACYMKE--THGSK*NKFDY 577
            L GR  + G  T+PRGL  GP  S     +   ++ +F S   ++KE   +G+   +FD 
Sbjct: 1081 LGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDC 1140

Query: 578  LAG 586
            LAG
Sbjct: 1141 LAG 1143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,274,822
Number of Sequences: 53049
Number of extensions: 575262
Number of successful extensions: 1309
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)