Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0115
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical...    28   6.5  
AF036705-9|AAO91724.1|  686|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical ...    28   6.5  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 567 SLITWRDEVGPTA-SRGSQSRKTSLHH 644
           S++T  D+ GPT  +RG  SRK  +HH
Sbjct: 126 SVLTAEDDGGPTTVTRGCHSRKMVMHH 152


>Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 567 SLITWRDEVGPTA-SRGSQSRKTSLHH 644
           S++T  D+ GPT  +RG  SRK  +HH
Sbjct: 126 SVLTAEDDGGPTTVTRGCHSRKMVMHH 152


>Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical
           protein D2013.5 protein.
          Length = 934

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 23  VISIDKRHMENPVFHVFCIDFGSTES 100
           +I + K HMENP   + CI  GS ++
Sbjct: 417 IIRMSKAHMENPNAIILCIQDGSVDA 442


>AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical
           protein F37C4.1 protein.
          Length = 612

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 218 KRFKQEIKIYLLHNLSTQIINYNYINDASI 129
           KRFK+ + +YLL  L + I  YN+  D +I
Sbjct: 75  KRFKRILPLYLLIILISMICLYNFFPDTAI 104


>AF036705-9|AAO91724.1|  686|Caenorhabditis elegans Hypothetical
           protein F37C4.2 protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 218 KRFKQEIKIYLLHNLSTQIINYNYINDASI 129
           KRFK+ + +YLL  L + I  YN+  D +I
Sbjct: 75  KRFKRILPLYLLIILISMICLYNFFPDTAI 104


>AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical
           protein F37C4.3 protein.
          Length = 685

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 218 KRFKQEIKIYLLHNLSTQIINYNYINDASI 129
           KRFK+ + +YLL  L + I  YN+  D +I
Sbjct: 73  KRFKRILPLYLLIILISMICLYNFFPDTAI 102


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 218 KRFKQEIKIYLLHNLSTQIINYNYINDASI 129
           KRFK+ + +YLL  L + I  YN+  D ++
Sbjct: 76  KRFKRILPLYLLIILISMICLYNFFPDTAV 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,819,269
Number of Sequences: 27780
Number of extensions: 291038
Number of successful extensions: 645
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)