Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0110
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.3  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   7.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.9  

>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 404 SKFDPKLQYKK 372
           SKFDP+ +YKK
Sbjct: 103 SKFDPQGEYKK 113


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 404 SKFDPKLQYKK 372
           SKFDP+ +YKK
Sbjct: 103 SKFDPQGEYKK 113


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 59  PSSIRNSESTDENYTVGYV 3
           PS    S+  D+N  VGYV
Sbjct: 178 PSKEEVSKKIDDNQKVGYV 196


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 404 SKFDPKLQYKK 372
           +KFDPK +YK+
Sbjct: 103 AKFDPKGEYKQ 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,969
Number of Sequences: 336
Number of extensions: 2697
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)