Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0109
(506 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25003| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 36 0.019
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 36 0.025
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 32 0.24
SB_41410| Best HMM Match : 7tm_1 (HMM E-Value=0.00049) 32 0.31
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_45700| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 31 0.72
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 0.72
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 30 1.3
SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_51913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 29 2.9
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_7006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 28 3.8
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 28 5.1
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 28 5.1
SB_57152| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.1e-25) 28 5.1
SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 28 5.1
SB_57597| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09) 27 6.7
SB_52488| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_44567| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_42889| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 8.9
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 27 8.9
SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1) 27 8.9
SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_25003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 300 GYNRHGYYPNNYQYNGHPNRFGNQGH--GYTPGYFGNGYRFRTSLTGTIYGGN-GGYPFR 470
GY GY PN YQY+GHPN + GH GY NGY++ G Y G+ GY +
Sbjct: 79 GYQYSGY-PNGYQYSGHPNGYQYSGHLNGYQYSGHPNGYQYSGHPNGYQYSGHPNGYQYS 137
Query: 471 PYP-GY 485
+P GY
Sbjct: 138 GHPNGY 143
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 309 RHGYYPNNYQYNGHPNRFGNQGH--GYTPGYFGNGYRFRTSLTGTIYGGN-GGYPFRPYP 479
++ YPN YQY+GHPN + G+ GY NGY++ L G Y G+ GY + +P
Sbjct: 63 KYSGYPNGYQYSGHPNGYQYSGYPNGYQYSGHPNGYQYSGHLNGYQYSGHPNGYQYSGHP 122
Query: 480 -GY 485
GY
Sbjct: 123 NGY 125
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 300 GYNRHGYYPNNYQYNGHPNRFGNQGH--GYTPGYFGNGYRFRTSLTGTIYGGN 452
GY G+ PN YQY+GHPN + GH GY NGY++ G Y G+
Sbjct: 115 GYQYSGH-PNGYQYSGHPNGYQYSGHPNGYQYSGHPNGYQYSGHPNGYQYSGH 166
Score = 31.1 bits (67), Expect = 0.55
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 300 GYNRHGYYPNNYQYNGHPN 356
GY G+ PN YQY+GHPN
Sbjct: 151 GYQYSGH-PNGYQYSGHPN 168
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 258 ITISQSQSSANEGGGYNRHGYYPNNYQ--YNGHPNRFGNQGHGYTPGY-FGNGYRFRTSL 428
+ I+ S S +GGG G Y Y+ Y G +R G G G GY G G
Sbjct: 129 LKIAPSISRGRDGGGGGYRGGYRGGYRGGYRGGRDRGGGYGGGGEGGYGMGGGDYSGGCG 188
Query: 429 TGTIYGGNGGY 461
G+ YGG G Y
Sbjct: 189 YGSSYGGGGDY 199
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 35.9 bits (79), Expect = 0.019
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 270 QSQSSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGG 449
Q S+AN N + Y N YQ G+ N +G G+ Y NGY+ T Y G
Sbjct: 1384 QGYSNANINNQGNINSYQSNGYQ--GNNNMYGYGGNNNV--YMNNGYQGNNLYTTNSYQG 1439
Query: 450 NGGYPFRPYP-GY 485
N Y + Y GY
Sbjct: 1440 NNYYQNKGYQNGY 1452
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 35.5 bits (78), Expect = 0.025
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNR-FGNQGHGYTPGYFGNGYRFRTS-LTGTIYGGNGGYPF 467
GGGY G Y G+ +G GHG GY G GY G+ YGG GGY
Sbjct: 158 GGGYRGRGRGGGGYGGGGYGGGGYGGGGHG-GGGYGGGGYGGGGGGYGGSGYGGGGGYGG 216
Query: 468 RPYPG 482
Y G
Sbjct: 217 GGYGG 221
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQ---YNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYP 464
GGGY G+ Y Y G +G G+G GY G GY S G G YP
Sbjct: 178 GGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGGGGYGGGGYGGGRSGGG---GYEVSYP 234
Query: 465 F 467
F
Sbjct: 235 F 235
Score = 30.3 bits (65), Expect = 0.95
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRF---GNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGY 461
GGGY G Y Y G + G G GY G +G G G YGG GGY
Sbjct: 139 GGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGG-GGY 196
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +3
Query: 294 GGGYNRHG-YYPNNYQYNGHPNRFGNQGHG-YTPGYFGNGYRFRTSLTGTIYGGNGG 458
GGGY G Y Y G G G G Y G +G G G YGG GG
Sbjct: 145 GGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGG 201
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 35.1 bits (77), Expect = 0.034
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = +3
Query: 318 YYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYPFRPYPGYSD 491
Y PNN Q + P QG +P FGN + S+ GT G G YP PY G ++
Sbjct: 2556 YMPNNGQASKSPGVTNPQG--MSPFMFGNAF---ASMFGTQGGSPGAYPGYPYMGMNN 2608
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 297 GGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGY 461
GGY +G Y Y G+ + + G+G G +GNG + + G GGY
Sbjct: 224 GGYGNYGGYSQG-GYGGYADNSWSGGYGSYDGGYGNGGDYSNGYSSYGGGYGGGY 277
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 32.3 bits (70), Expect = 0.24
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Frame = +3
Query: 279 SSANEGGGYNRHGYYPN-NY--------QYNGHPNRFGN-QGHGYTPGYFGNGYRFRTSL 428
+ N GGY GYY + NY Y G GN G Y GY+ +GY +
Sbjct: 338 ADGNYAGGYYAGGYYADGNYADGNNADGNYAGGNYAGGNYAGGNYAGGYYADGYYTDGNY 397
Query: 429 T-GTIYGGNGGYPFRPYPGYSDEDY 500
T G GGN + Y+D +Y
Sbjct: 398 TDGNYAGGNYAGGYYADGNYADGNY 422
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +3
Query: 297 GGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNG-YRFRTSLTGTIYGGN---GGYP 464
G Y GYY + Y +G+ G Y GY+ +G Y + G GGN G Y
Sbjct: 320 GNYT-DGYYADGYYADGNYADGNYAGGYYAGGYYADGNYADGNNADGNYAGGNYAGGNYA 378
Query: 465 FRPYPG--YSDEDY 500
Y G Y+D Y
Sbjct: 379 GGNYAGGYYADGYY 392
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = +3
Query: 297 GGYNRHGYYPNNYQYNGH---PNRFGNQ--GHGYTPGYF-GNGYRFRTSLTGTIYGGNGG 458
GGY G Y Y +G+ N G G Y GY+ G+GY + G IY +G
Sbjct: 163 GGYYADGNYAGGYYADGNYIDGNYTGGNYAGCNYADGYYAGDGYYAGGNYAGGIY-TDGN 221
Query: 459 YPFRPYPGYSDEDYN 503
Y Y G + D N
Sbjct: 222 YADGYYAGGNYADGN 236
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +3
Query: 279 SSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHG-YTPGYFGNGYRFRTSLTGTIYGGNG 455
+ N GGY G Y + Y G GN G Y G + GY + G Y G G
Sbjct: 443 ADGNYAGGYYASGNYADG-NYAG-----GNYADGNYEDGNYAGGYYADGNYAGGYYAG-G 495
Query: 456 GYPFRPYPG--YSDEDY 500
Y Y G Y+D +Y
Sbjct: 496 NYADGNYAGGNYADGNY 512
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRFGNQGHG-YTPGYFGNGYRFRTSLTGTIYG-GNGGYPF 467
GG Y + +NY + GN G YT GY+ GY + G Y GN +
Sbjct: 229 GGNYADGNHDDSNYAGGNYTG--GNYADGNYTDGYYAGGYYADGNYAGGNYADGNHTDGY 286
Query: 468 RPYPGYSDEDY 500
Y+D +Y
Sbjct: 287 YADGNYTDGNY 297
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Frame = +3
Query: 294 GGGYNRHGYYPNNY---QYNGHPNRFGNQGHG-YTPGYFGNGYRFRTSLTGTIYGGNGGY 461
GG Y Y NY Y G GN G Y G + GY + Y G G Y
Sbjct: 564 GGNYAGGNYADGNYADGNYTGGNYEDGNYAGGNYADGNYAGGYYAGGNYADGNYAG-GNY 622
Query: 462 PFRPYPG--YSDEDY 500
Y G Y+D +Y
Sbjct: 623 ADGNYAGGNYADGNY 637
Score = 28.7 bits (61), Expect = 2.9
Identities = 27/74 (36%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Frame = +3
Query: 279 SSANEGGGYNRHGYYPN-NY---QYNGHPNRFGNQGHG------YTPG-YFGNGYRFRTS 425
+ N GGY GYY + NY Y G GN G YT G Y G Y
Sbjct: 633 ADGNYAGGYYAGGYYTDGNYTDGNYAGGNYAGGNYAGGNYADCNYTGGNYAGGNYAGGNY 692
Query: 426 LTGTIYGGN--GGY 461
G GGN GGY
Sbjct: 693 ADGNYTGGNYAGGY 706
Score = 28.3 bits (60), Expect = 3.8
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 279 SSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHG-YTPGYFGNGYRFRTSLTGTIYGGNG 455
+ N GY GYY + Y G GN G YT G + +G + T Y G G
Sbjct: 107 ADGNYTDGYYAGGYYADG-NYAGGNYADGNHIDGNYTGGNYADGNYADGNYTDGYYAG-G 164
Query: 456 GYPFRPYPG--YSDEDY 500
Y Y G Y+D +Y
Sbjct: 165 YYADGNYAGGYYADGNY 181
Score = 27.1 bits (57), Expect = 8.9
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +3
Query: 279 SSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGG 458
+ N GG GYY + +G+ G Y G + +G + G Y +G
Sbjct: 518 ADGNYAGGNYAGGYYTDGNYTDGNYAGGNYAGGNYAGGNYADGNYTGGNYAGGNY-ADGN 576
Query: 459 YPFRPYPGYSDEDYN 503
Y Y G + ED N
Sbjct: 577 YADGNYTGGNYEDGN 591
>SB_41410| Best HMM Match : 7tm_1 (HMM E-Value=0.00049)
Length = 780
Score = 31.9 bits (69), Expect = 0.31
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 488 GISGIRPKGIPSITTVNSSR*TGTEPVAVPKVSWCVAVPLVTETVRMSIILIVV-WVISM 312
G++ I + + + SS G E VAV S V ++T +V + +I WV +
Sbjct: 148 GVAVITSSVVEGVAVITSS---GVEGVAVITSSKVEGVAVITSSVVEGVAVITSSWVEGV 204
Query: 311 AIVTTAFVSRRLRLANGYVDGIAPVMS 231
A++T++ + + + V+G+A + S
Sbjct: 205 AVITSSALEGVAVITSSGVEGVAVITS 231
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = -1
Query: 494 LIGISGIRPKGIPSITTVNSSR*TGTEPVAVPKVSWCVAVPLVTETVRMSIILIVVWVIS 315
L G++ I G+ + + SS+ E VAV SW V ++T + WV
Sbjct: 3 LEGVAVITSSGVERVAVITSSK---VEGVAVITSSWVEGVAVITSS----------WVEG 49
Query: 314 MAIVTTAFVSRRLRLANGYVDGIAPVMS 231
+A++T++ V + + ++G+A + S
Sbjct: 50 VAVITSSAVEGVAVITSSALEGVAVITS 77
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 31.9 bits (69), Expect = 0.31
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Frame = +3
Query: 267 SQSQSSANEGGGYNRHGYYPNNYQYNGHPNR---FGNQG--HGYTPGYFG---NGYRFRT 422
S S + YN+ Y+ + Q N H N+ GNQ HGY GY G NG +
Sbjct: 717 SDPNSFHGDQNSYNQGSYHGD--QDNRHDNQGSYHGNQESYHGYQDGYHGSDQNGNHGKQ 774
Query: 423 SL----TGTIYGGNGGYPFRPYPGYSDE 494
G+ YG G Y YP + DE
Sbjct: 775 DSYHGDQGSYYGSQGSYHGNDYP-FGDE 801
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +3
Query: 267 SQSQSSANEGGGYNRHGYYPNNYQ--YNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTI 440
+ ++ NE G + +G+Y ++Q Y+ PN F + Y G + R G+
Sbjct: 690 NSNEEQYNENG-FEYNGHYGADHQGSYHSDPNSFHGDQNSYNQGSYHGDQDNRHDNQGSY 748
Query: 441 YGGNGGYPFRPYPGYSDEDYN 503
+G Y GY D N
Sbjct: 749 HGNQESY-HGYQDGYHGSDQN 768
>SB_45700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -1
Query: 371 LVTETVRMSIILIVVWV-ISMAIVTTAFVSRR--LRLANGYVDGIAPVMSPISFL 216
LV + +++ I+VWV + + ++ F+ + + L GY+ G+ P++ PI ++
Sbjct: 328 LVKTLLLVTLTSIIVWVPVMVVLILKTFIQVKDGVYLTVGYIGGLNPLLDPIIYI 382
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRFGNQGHGY-TPGYFGNGYRFRTSLTGTIYGGNGGYPF- 467
G G G +P + Y G P+ FG G G GY + + + GG G P
Sbjct: 327 GFGSMGFGGFPGAFGYGGFPSGFGGFGFGADKAGYSSESRGYSGTADPDVAGGRGSIPLS 386
Query: 468 -RPYPGY 485
R GY
Sbjct: 387 SRESAGY 393
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 255 NITISQSQSSANEGGG---YNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTS 425
+I +S +S+ G G Y+ + +G P+ F Y PG F +GY + TS
Sbjct: 382 SIPLSSRESAGYGGAGATPYSGYSQMTAAAMASGTPSEFSGS---YPPGMFNSGYGYGTS 438
Query: 426 LTG 434
G
Sbjct: 439 AAG 441
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 303 YNRHGYYPNNYQYNGHPNRFGNQGHGYTPG--YFGNG 407
YN GYYP +Y + + G+G PG Y G G
Sbjct: 1310 YNYPGYYPPDYYQRYYEEYYRQMGYGSAPGSQYSGEG 1346
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNG 407
G G+N GY P Y G+ G+ GYTP Y GNG
Sbjct: 236 GKGFNAFGYTP---YYVGN----GSNAFGYTPYYVGNG 266
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +3
Query: 327 NNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYPFRPYPGYSDEDYNR 506
N + Y + G GYTP Y GNG T Y GNG F P Y +D R
Sbjct: 226 NAFGYTPYYVGKGFNAFGYTPYYVGNGSN-AFGYT-PYYVGNGSNAFGYTPYYVAKDLIR 283
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -1
Query: 422 GTEPVAVPKVSWCVAVPLVTETVRMS-IILIVVWVISMAIVTTAFVSRRLRLANGYVDGI 246
G P+ + +V+W P VT+TV M +++IVV ++ M ++ RL +NG D +
Sbjct: 555 GLSPI-LTRVAWR---PHVTDTVAMDQVLMIVVLMVIMLVMAMTMAIIRLYCSNGDSDSV 610
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 SQSSANEGGGYNRHGYYPNNYQYNGHPNRFGNQG---HGYTPGYFGNGYRFRTSLTGTIY 443
+ + N GG N G NN + NG N GN G +G G NG + G
Sbjct: 517 NNNGGNNNGGNNNGGN--NNGENNGGNNNGGNNGGSNNGGNDGSNNNGGNTGGNNNGGNT 574
Query: 444 GGNGG 458
GGN G
Sbjct: 575 GGNNG 579
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 273 SQSSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNG 407
+ + N GG N G NN + NG N GN G G NG
Sbjct: 483 NNNGGNNNGGNNNGGN--NNGENNGGNNNGGNNNGGNNNGGNNNG 525
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +3
Query: 291 EGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGG 458
E G N +G N NG N GN G G G + G+ GGN G
Sbjct: 502 ENNGGNNNGGNNNGGNNNGGNNNGGNNNGGNNNGENNGGNNNGGNNGGSNNGGNDG 557
>SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 492
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 321 YPNNYQYNGHPNRFG-NQGHGYTPGYFGNGYRFRTSLTGTIYG 446
Y N Y N N G N G+ Y GY+ NGY R + YG
Sbjct: 393 YNNGYNNNNGYNSNGYNNGYNYNNGYY-NGYYDRYNRNNGYYG 434
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 327 NNYQYNGHPNRFGNQGHGYTPGY-FGNGY 410
NN NG+ N G +GY GY + NGY
Sbjct: 390 NNVYNNGYNNNNGYNSNGYNNGYNYNNGY 418
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 273 SQSSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGY 383
+ ++ GYN +GY NN YNG+ +R+ N+ +GY
Sbjct: 398 NNNNGYNSNGYN-NGYNYNNGYYNGYYDRY-NRNNGY 432
Score = 27.9 bits (59), Expect = 5.1
Identities = 24/58 (41%), Positives = 25/58 (43%)
Frame = +3
Query: 333 YQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYPFRPYPGYSDEDYNR 506
YQY G N N G+ GY NGY G Y N GY Y GY D YNR
Sbjct: 384 YQY-GLNNNVYNNGYNNNNGYNSNGYN-----NG--YNYNNGY----YNGYYDR-YNR 428
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 303 YNRHGYYPNN-YQYNGHPNRFGNQGHGYTPGYF 398
YN +GY NN Y NG+ N + N +GY GY+
Sbjct: 393 YN-NGYNNNNGYNSNGYNNGY-NYNNGYYNGYY 423
>SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1247
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 294 GGGY-NRH---GYYPNNYQYNGHPNRFGNQGHGYTPG 392
GGGY N H GY+ +Y H N+F +QG Y G
Sbjct: 318 GGGYPNVHVIRGYHTAADEYPSHLNQFSDQGGTYNSG 354
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 366 NQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYPFRPYPGY 485
++ HG+ P GY R + G GGYP RP GY
Sbjct: 779 SETHGWLPSETCGGYPVR-HVDGYPVRPKGGYPVRPKSGY 817
>SB_51913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 249 DSPRDVPHILPGSPHSLGALGILHILDIVQAF 154
DS ++PHI P S AL + H+L I Q F
Sbjct: 42 DSFNNIPHIAPDSQLLKVALLVTHLLTIAQGF 73
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -1
Query: 404 VPKVSWCVAVPLVTETVRMSIILIVVW---VISMAIVTTAFVSRRLRLANGYVDGIAPVM 234
VP V V VP+V V ++++VV V+ ++IV V + ++ V + PV+
Sbjct: 1235 VPDVVVVVFVPVVVVVVVAPVVVVVVVPIVVVVVSIVVVVVVVSIVVVSVSAVVVVVPVV 1294
Query: 233 SPISFLVAPIALVPLV 186
+ +V + +VP+V
Sbjct: 1295 VVVVSVVVVVVVVPVV 1310
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 279 SSANEG-GGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNG 455
S A+ G GGY G G +G G GY Y G GY G+ YGG G
Sbjct: 193 SPADGGRGGYGGRGRGGGGRGGYGGGGGYGGYG-GYDQ-YSGGGYGGYGDSYGS-YGGGG 249
Query: 456 GY--PFRPYPGY 485
GY + Y GY
Sbjct: 250 GYGSSYGSYDGY 261
>SB_7006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 301 VTIAMDITQT-TISIMDILTVSVTKG-TATHQDTLGTATGSVPV 426
+TI++ IT T TI+I +T+++T T T DT+ TAT ++ +
Sbjct: 2 ITISITITITITITITITITITITITITITITDTITTATATIAI 45
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 288 NEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTS-LTGTIYG 446
N GY+ G Y + +G + FG G G+ G G G S LTG YG
Sbjct: 2068 NSSHGYSGRGLYGDTNPGHGKDSSFGGSGAGH-GGSGGRGNIISGSPLTGFAYG 2120
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +3
Query: 288 NEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGY-----FGNGYR-FRTSLT-GTIYG 446
+EGGG R YP + GH + + + G + G G GYR + + + Y
Sbjct: 416 SEGGGGGRRYDYPPPDRPRGHSSGYYDNRRGNSRGMRGGPRRGQGYRPWHSRMEYNDNYS 475
Query: 447 GNGGYPFRPYPGYSD 491
NG YP P + D
Sbjct: 476 NNGLYPHESNPRHRD 490
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRFG--NQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYPF 467
GGG GY Y G +G + G GY G G GY G YGG G + +
Sbjct: 180 GGGSQGGGYRSGGGGYGGSKGGYGGGSGGGGYGGGRGGGGYGGGHGGGG--YGGGGRHDY 237
>SB_57152| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.1e-25)
Length = 316
Score = 27.9 bits (59), Expect = 5.1
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Frame = +3
Query: 303 YNRHGYYPNNYQYNGHPNR-FGNQGH---GYT-PGYFGNGYRFRTSLTGTIYGGNGGYPF 467
Y GY Y G+PN + N G+ GYT GY GY T Y N GY
Sbjct: 196 YTNAGYTNAGYANAGYPNAGYTNAGYTNAGYTNAGYANAGYT-NAGYTNAGY-ANAGYTN 253
Query: 468 RPY--PGYSDEDY 500
Y GY++ Y
Sbjct: 254 AGYINAGYANAGY 266
>SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 345
Score = 27.9 bits (59), Expect = 5.1
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -1
Query: 359 TVRMSIILIVVWVISMAIVTTAFVSRRL 276
T R+S+ ++ W++S +VT + ++ L
Sbjct: 62 TTRISVAIVSFWILSFTVVTVGYYNQEL 89
>SB_57597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 491 IGISGIRPKGIPSITTVNSSR*TGTEPVAVPKVS 390
+G+ G+RP G+ + V S T AVP VS
Sbjct: 127 VGVIGVRPVGVSGASAVGVSGVTPVYMYAVPSVS 160
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.5 bits (58), Expect = 6.7
Identities = 26/76 (34%), Positives = 30/76 (39%)
Frame = +3
Query: 273 SQSSANEGGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGN 452
S S N G + G ++ Y H R G+ G G G G GY G YGG
Sbjct: 1238 SSGSRNRGRRHGGGGGAFSSRDYRQH--RGGSSGGGMHGG--GGGY-------GN-YGGY 1285
Query: 453 GGYPFRPYPGYSDEDY 500
GGY P GY Y
Sbjct: 1286 GGYGGNPQGGYGFAGY 1301
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -1
Query: 404 VPKVSWCVAVPLVTETVRMSIILIVVW---VISMAIVTTAFVSRRLRLANGYVDGIAPVM 234
VP V V VP+V V ++++VV V+ +++V V + ++ V + PV+
Sbjct: 250 VPDVVVVVFVPVVVVVVVAPVVVVVVVPIVVVVVSVVVVVVVVSIVVVSVPAVVVVVPVV 309
Query: 233 SPISFLVAPIALVPLV 186
+ +V + +VP+V
Sbjct: 310 VVVVSVVVVVVVVPVV 325
>SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09)
Length = 402
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 NRHGYYPN-NYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTGTIYGGNGGYP 464
N HG P+ N Y GH +G Q HGY +G ++ G GG P
Sbjct: 44 NPHGNPPSYNPGYGGHQG-YGQQPHGYGGQQYGQYGPPPSAYPGQFSAPTGGPP 96
>SB_52488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 195 ALGILHILDIVQAFDIISACGSSWVLLSKSVLD*AP 88
AL I +LDI A DI A + ++L + S+LD P
Sbjct: 131 ALDIYPVLDIYPALDIYPALDTYFILDTYSILDTYP 166
>SB_44567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 92 AQSKTDLLSRTQELPHAEIMSKAWTMSRIWRIPRAP 199
AQ K +L T +++ +W + +W++P+AP
Sbjct: 343 AQIKVKVLRFTPSTNPTKLVDLSWIVWDVWQLPKAP 378
>SB_42889| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 336
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 366 NQGHGYTPGYFGNGYRFRTSLTGTIY 443
++G+G+ PG Y+F T+LT TI+
Sbjct: 166 DEGYGFQPGKAMCLYKFETNLTFTIF 191
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 252 INITIS-QSQSSAN-EGGGY-NRHGYYPNNYQYNGHPNRFGN 368
+ IT S Q SS N +G G N HG +N Q NG+ N+ GN
Sbjct: 308 VGITESYQGNSSGNLQGNGNGNPHGNGNDNLQGNGNGNQQGN 349
>SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1)
Length = 630
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 273 SQSSANEGGGYNRHGYY--PNNYQYNGHPNRFGNQGHG 380
+ SSA GG +++ Y P Y GHP + QG G
Sbjct: 404 ANSSAPRGGSQHQNLLYNAPQIQPYQGHPQGYPPQGDG 441
>SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = -1
Query: 389 WCVAVPLVTETVRMSIILIVVWVISMAIVTTAFVSRRL 276
W +A+ L+T + +++ LIV+W+I++ ++ + RL
Sbjct: 777 WLIALRLITLRL-IALRLIVLWLIALQLIALRLIVLRL 813
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 436 LFTVVMEGIPLGLIPDIPM 492
LF V++GIPLGL IP+
Sbjct: 64 LFLYVLQGIPLGLAGSIPL 82
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 294 GGGYNRHGYYPNNYQYNGHPNRFGNQGHGYTPGYFGNGYRFRTSLTG-TIYGGNG 455
GGGY G+ +Y +G+ + + G+G G +G G TG YG G
Sbjct: 785 GGGYGGGGHRGGSY--SGYRGSYKSGGYGQGSGGYGQGSGGYNRNTGYNTYGSYG 837
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,446
Number of Sequences: 59808
Number of extensions: 360900
Number of successful extensions: 1291
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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