Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0108
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 36 0.036
SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05) 33 0.26
SB_46593| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_11877| Best HMM Match : efhand (HMM E-Value=7.8e-07) 31 0.59
SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09) 31 0.59
SB_693| Best HMM Match : efhand (HMM E-Value=2e-09) 31 0.59
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 31 0.78
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 30 1.8
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_22780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_10060| Best HMM Match : SAP (HMM E-Value=0.016) 29 3.2
SB_54429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 4.2
SB_37499| Best HMM Match : 7tm_1 (HMM E-Value=4e-09) 29 4.2
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 4.2
SB_10444| Best HMM Match : Drf_FH1 (HMM E-Value=9.2) 29 4.2
SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16) 29 4.2
SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17) 29 4.2
SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11) 28 5.5
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_23274| Best HMM Match : DUF624 (HMM E-Value=9.3) 28 7.3
SB_16160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 27 9.7
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 27 9.7
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 27 9.7
SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 101 bits (243), Expect = 4e-22
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Frame = +1
Query: 202 SPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLKFMNHKKSR 381
+P V L RW+++WLL+ ER RRL E+L + + + F++ +W+ RF K+++ KSR
Sbjct: 5977 NPAVSHLSKRWQHLWLLSMERLRRLQEKLERIAIKRASAKFNFPEWKSRFNKWLHDSKSR 6036
Query: 382 LTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGDGRRXXXXXXXXXXXXXXXKEFIA 561
+ D+FR+MD D +G + R +FI G++NT F P KEF+
Sbjct: 6037 VQDIFRRMDHDRDGKLTREQFITGVLNTSF---PTERWEMEIVASKFERNGLIDYKEFMN 6093
Query: 562 AL--PPDWVERRGPPTDADKIHDEVKR 636
AL P + P TDA KIH+E+ R
Sbjct: 6094 ALKDKPSAKKPEKPKTDAQKIHNEIDR 6120
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Frame = +1
Query: 322 FSWDDWRKRFLKFMNHKKS-------RLTDLFRKMDKDNNGLIPRNEFIDGI 456
FS D +K+ L+ +N K RL DLF + DKDN+ + R+EF G+
Sbjct: 580 FSGDTKKKKILELINMLKEYVERMNYRLVDLFNQFDKDNSLSVTRDEFYTGL 631
>SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05)
Length = 520
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +1
Query: 355 KFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNT 465
++++ ++ RL DLF + DKD N ++ R EF + I +T
Sbjct: 177 EYLDQRRLRLVDLFAQADKDKNWVVTRVEFRNIIRST 213
>SB_46593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 PGRETPDRNLPHYGPRFP-PKGSKGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERL 288
P E D N+ Y F P G PEF + KQ D W ++ LA E+
Sbjct: 361 PSEEVFDTNIYAYTLEFAMPNIYSGLTPEFLDGK-KQGADEWTSIPTLADALGTDYMEKA 419
Query: 289 AHLKELQRVSNFSWDDWRKRF 351
A + V N WDD + +F
Sbjct: 420 AERAKQFFVRNNDWDDSKNKF 440
>SB_11877| Best HMM Match : efhand (HMM E-Value=7.8e-07)
Length = 390
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 280 ERLAHLKELQRVSNFSWDDWRKRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIV 459
+ LA L E S + + ++ L++ RL D+F++ D DN+G + +EF G+
Sbjct: 255 QELADLAEELCNSAKRFSAFPEKMLEWFTFNYYRLIDVFKRFDTDNSGKLSYDEFFLGMQ 314
Query: 460 NTKFDTSPAGDGR 498
+ T+ + R
Sbjct: 315 DLALFTTDSRRSR 327
>SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 508
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGI 456
++ + R+ DLFR++DKD + + EF++G+
Sbjct: 420 YLAREHVRVVDLFRRLDKDQSMQVSVREFVEGL 452
>SB_693| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 500
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGI 456
++ + R+ DLFR++DKD + + EF++G+
Sbjct: 412 YLAREHVRVVDLFRRLDKDQSMQVSVREFVEGL 444
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 187 EPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFL 354
E E R + L +RW ++ + + ERQ LHE+L L++ Q W D ++ +
Sbjct: 554 ENEIRDQMIS-LNERWESLRITSMERQTSLHEQLMSLQQRQIDQLAEWLDKAEKII 608
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = +1
Query: 133 RNLPHYGPRFPPKGSKGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQR 312
++L G + + A+ E R+K + RWRN+ LA +R ++L K L
Sbjct: 713 KDLQTRGVTAAKEATSRADQESLENRLKDIVQRWRNINKLAGDRSKKLE------KLLPV 766
Query: 313 VSNFSWDDWRKRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNE 441
V N+ +R L +++ + RL +L + N ++ + +
Sbjct: 767 VMNYV--QYRNNLLAWLSADEKRLQELALNDEVSNMDVLSQKQ 807
>SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 373 KSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTK 468
+ LT LF ++D+D +G + NEF+ G+ K
Sbjct: 274 EQELTLLFEELDEDGDGKVSFNEFLHGLFAAK 305
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 367 HKKSRLTDLFRKMDKDNNGLIPRNEF 444
HK + ++F+K DKD +G I R EF
Sbjct: 91 HKIRKAIEMFKKYDKDASGSIDREEF 116
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 262 RQRRLHERLAHLKELQRVSNFSWDDWRKRFLKFMNH--KKSRLTDLFRKMDKDNNGLIPR 435
R ++ + + K+ + ++ S D R+ F + M+ K + +K+DKD NG I
Sbjct: 89 RYHKIRKAIEMFKKYDKDASGSID--REEFKQLMHETGNKVNIDKALKKLDKDGNGQISF 146
Query: 436 NEFI 447
EF+
Sbjct: 147 TEFL 150
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 391 LFRKMDKDNNGLIPRNEFIDGI 456
+FR DK+N+G I NEFI G+
Sbjct: 71 VFRTFDKNNDGTIDFNEFIQGL 92
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = -2
Query: 605 SVGGPRRSTQSGGSAAMNS---FPVDEAATVPVETDPPRRPSP--AGDVSNLVLTMPSM 444
S GG T S GS+ M S P + VP+ PRRP P A + ++ + T PS+
Sbjct: 2012 SEGGGSTGTPSVGSSRMASDMGLPNISRSPVPIVPSQPRRPVPRNARNANSPITTTPSV 2070
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +1
Query: 88 SRRFSRISPGRETPDRNLPHYGPRFPPKGSKGAEPEFRSPRVKQLWDRWRNVWLLAWERQ 267
SR SR +P R TP R R P + + + ++P++ LW R + V +E
Sbjct: 249 SRTSSRTTPARATPSRK----SSRTPSQTPRSQQR--KTPKLDLLWTRKQGVMYNLFEWP 302
Query: 268 RRLHERL 288
R H +L
Sbjct: 303 SRRHSKL 309
>SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 184 AEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVS 318
+EPE R+ R Q+W + ++ +RQ RL ++ +++RV+
Sbjct: 51 SEPECRAQRESQVWTKAFTIYYKGGKRQGRLLDKNGRQYQVKRVT 95
>SB_22780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 1 SEERHEGTPGRGSQHDLHRDRSVSPDYYGSRRFSRISPGRETPDR 135
S+ H G PG G D++ V PD+ G RI E+ D+
Sbjct: 69 SQNAHYGRPGSGYIIDINGQILVKPDFNGGHLGYRIETQTESRDK 113
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 364 NHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTK 468
N + + ++ ++D D NG++ NEF+D + N K
Sbjct: 180 NPTEEEIQEMVNEVDYDGNGVLDFNEFVDLMENQK 214
>SB_10060| Best HMM Match : SAP (HMM E-Value=0.016)
Length = 332
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 16 EGTPGRGSQHDLHRDRSVSPDYYGS-RRFSRISPGRETPDRNLPHYGPRFPPKGSKGAEP 192
EGTPG S L DR + G R I PD NL H GP F + +K +E
Sbjct: 169 EGTPGSASPLGL--DRPLDEALEGKITRGEHIDLALLLPD-NLAHAGPEFQLRFAKNSES 225
Query: 193 EFRSPRVKQLWDRWRNVWLLAWER 264
+Q D + W++A+ R
Sbjct: 226 VRLLRNKRQSIDSFYK-WVIAYTR 248
>SB_54429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 238 CATGPTAASRGAT*TPALHLCFPSAGIGVRSGAGSDLA 125
C+TG RG T C PSA +G+ SGA SD A
Sbjct: 109 CSTGKKCVLRGEGMTHKCEDCLPSA-MGMESGAISDSA 145
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = -1
Query: 303 FLEMGEALVQPPLALPGEQPHVAPPVPQLLHAGRPELRLCTFASLRRESGSVVGQVPIWR 124
FLE GE V PPL G + P + LC RR + +G V W
Sbjct: 459 FLEGGETAVCPPLPGGGTAERLPPRQSAPSRSMAITSLLCGSTFERRTTVLSMGVVSDWS 518
Query: 123 LPSRADTTESSRSVV 79
+P+ + T R V
Sbjct: 519 IPATSPYTTEQRHEV 533
>SB_37499| Best HMM Match : 7tm_1 (HMM E-Value=4e-09)
Length = 378
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 129 RSEPAPLRTPIPAEGKQRCRAGVQVAPR 212
RS PA LRT + +G R GV+ PR
Sbjct: 256 RSRPATLRTVLGGDGADRAPRGVRPGPR 283
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +1
Query: 10 RHEGTPGRGSQHDLHRDRSVSPDYYGSRRFSRISPGRETPDRNLPHYGPRFPP 168
RH+ P R RD YY R R P R+ P R Y +PP
Sbjct: 239 RHDLPPPRDPYDRERRDPYERDPYYDHRDDPRDDPRRDDPYRRYDDYPRDYPP 291
>SB_10444| Best HMM Match : Drf_FH1 (HMM E-Value=9.2)
Length = 263
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 590 RRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPA 483
R++ Q G AA V +A VPV P R P PA
Sbjct: 151 RKTGQDAGQAAHPKKAVSPSAAVPVSKIPRRSPLPA 186
>SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16)
Length = 621
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 542 VDEAATVPVETDPPRRPSPAGDVSNLVLTM 453
V+E T P T+P P P SN+ L M
Sbjct: 275 VEEPETFPDSTEPEEEPEPVSSTSNIDLLM 304
>SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17)
Length = 560
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 611 SASVGGPRRSTQSGGSAAMNSFPVDEAATVPVETDPPRRPSPAGDVSN 468
S + P +T++GG N+ V +A +P++T PP +P SN
Sbjct: 8 SVAAETPASNTRNGGKPLNNNGNVADA--MPIDTAPPAKPEVEPKASN 53
>SB_37225| Best HMM Match : LRR_1 (HMM E-Value=2.6e-11)
Length = 497
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 355 KFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGI 456
+++ K+ R DLF +DKD + + E I+G+
Sbjct: 427 EYLIEKRLRAVDLFNCLDKDKSRSVSPEELIEGL 460
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 373 KSRLTDLFRKMDKDNNGLIPRNEFIDGI-VNTKFDTSPAGDGR 498
K RL +LF K+D D + I E ++ I VN K T + + R
Sbjct: 78 KQRLRELFPKIDVDQDQKISLKELVEWIDVNMKKHTRKSSESR 120
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 379 RLTDLFRKMDKDNNGLIPRNEFIDGI 456
R+ +LF+++DK+ +G I NE +G+
Sbjct: 16 RVEELFKELDKNQDGKIDVNELAEGL 41
>SB_23274| Best HMM Match : DUF624 (HMM E-Value=9.3)
Length = 182
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 352 LKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAG 489
LKF + ++ D F K DK + +IPRN I DT P G
Sbjct: 136 LKFCKYLRAGNEDSFEKADKIPDEVIPRNIIIGHQKVPLKDTPPKG 181
>SB_16160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 373
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 189 LCTFASLRRESGSVVGQVPIW 127
LCTF LRR +V+G V W
Sbjct: 54 LCTFRLLRRTPSTVIGAVAYW 74
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +1
Query: 64 SVSPDYYGSRRFSRISPGRE----TPDRN-LPHYGPRFPPKGSKGAEPEFRSPRV 213
S SP+ GS + SPGR +PDR LPH P P + G RSP V
Sbjct: 659 SYSPERSGSHSEPQ-SPGRGHQSGSPDRRQLPHSAPVTPQRHPHGENMIHRSPLV 712
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 373 KSRLTDLFRKMDKDNNGLIPRNEFIDG 453
+ R +FR+MDK+ +G + EFI+G
Sbjct: 146 EKRTEKIFRQMDKNLDGKLSLEEFIEG 172
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 379 RLTDLFRKMDKDNNGLIPRNEFIDGI 456
RL +F+++D+DN+G I NE + +
Sbjct: 69 RLEKIFQEIDEDNSGYIDHNEISNAL 94
>SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 124 TPDRNLPHYGPRFPPKGSKGAEPEFRSP 207
TPDR++P P P GS P SP
Sbjct: 40 TPDRSVPPTPPAVSPPGSGYVSPTLHSP 67
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 93 KIQSYQPWTGDARSEPAPLRTPIPAEGKQRC 185
K ++ Q T S PAP TP P GK C
Sbjct: 264 KFENIQDVTQPPPSTPAPPNTPAPPSGKFSC 294
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 297 EMGEALVQPPLALPGEQPHVAPP 229
++ E L++ PL LP E+P + PP
Sbjct: 1693 DVKEDLIKQPLVLPNEKPPLPPP 1715
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,280,380
Number of Sequences: 59808
Number of extensions: 456361
Number of successful extensions: 1970
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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