Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0108
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 100 8e-22
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 100 8e-22
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 100 8e-22
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 100 8e-22
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 88 4e-18
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 88 4e-18
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 88 4e-18
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 36 0.024
AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase ... 36 0.024
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 36 0.024
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 30 1.2
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 30 1.6
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 2.1
AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical ... 29 2.1
AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical ... 29 2.1
U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.8
Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 28 4.9
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 28 4.9
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 28 4.9
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 28 4.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 27 8.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 100 bits (240), Expect = 8e-22
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGDGRRXXXXXXXXXXXX 537
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSKFPTSRLEMAK--VADRFDKGDGM 4695
Query: 538 XXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 INAKEFINALRFDASNRNAKPQTDTEKITHEIE 4728
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 100 bits (240), Expect = 8e-22
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGDGRRXXXXXXXXXXXX 537
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSKFPTSRLEMAK--VADRFDKGDGM 4695
Query: 538 XXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 INAKEFINALRFDASNRNAKPQTDTEKITHEIE 4728
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 100 bits (240), Expect = 8e-22
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGDGRRXXXXXXXXXXXX 537
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSKFPTSRLEMAK--VADRFDKGDGM 4695
Query: 538 XXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 INAKEFINALRFDASNRNAKPQTDTEKITHEIE 4728
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 100 bits (240), Expect = 8e-22
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSPAGDGRRXXXXXXXXXXXX 537
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSKFPTSRLEMAK--VADRFDKGDGM 4695
Query: 538 XXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 INAKEFINALRFDASNRNAKPQTDTEKITHEIE 4728
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4695
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4739
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4033 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4092
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4093 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4150
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4151 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4194
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4695
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4739
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4033 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4092
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4093 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4150
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4151 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4194
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4578 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4637
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4638 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4695
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4696 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4739
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 88.2 bits (209), Expect = 4e-18
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Frame = +1
Query: 178 KGAEPEFRSPRVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLK 357
K A+ R+P + L W+ +WL A Q L + A L+E++R+ + W+DW++R+++
Sbjct: 4033 KSAKKGARNPAAEMLSTEWKKLWLDAMGLQSSLDNQKALLEEMKRLEGWKWEDWKERYVE 4092
Query: 358 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVN-----------TKFDTSPAGDGRRX 504
+ +H K+R+ DLFR++D+ + G +PR FIDGI+ +KF TS +
Sbjct: 4093 WNDHAKARVNDLFRRIDRLHTGNVPRQVFIDGIIGSNYVPNSTIVYSKFPTSRLEMAK-- 4150
Query: 505 XXXXXXXXXXXXXXKEFIAALPPDWVERRG-PPTDADKIHDEVK 633
KEFI AL D R P TD +KI E++
Sbjct: 4151 VADRFDKGDGMINAKEFINALRFDASNRNAKPQTDTEKITHEIE 4194
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 343 KRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFID 450
K ++ + KS L LFR MDKDN+G + EFID
Sbjct: 621 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFID 656
>AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform b protein.
Length = 572
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 343 KRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFID 450
K ++ + KS L LFR MDKDN+G + EFID
Sbjct: 486 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFID 521
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 343 KRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFID 450
K ++ + KS L LFR MDKDN+G + EFID
Sbjct: 621 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFID 656
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -1
Query: 297 EMGEAL-VQPPLALPGEQPHVAPPVPQLLHAGRPEL----RLCTFASLRRESGSVVGQVP 133
++G+ L QPP P P PP P +H +PE+ +L T A+ R++
Sbjct: 288 DIGKTLSTQPPRRTPQPHPKPPPPPPPPIHEAQPEVSDSNKLGTTAASRKDCEQSDENC- 346
Query: 132 IWRLPSRADTTESSRSVVVG 73
+ P+ A SS + ++G
Sbjct: 347 --KTPTSAPAESSSTAGIIG 364
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 223 WDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLKFMNHKKSRLTD 390
W +++V LL W+ R+ L +L + ++D+WRK ++ +N ++ D
Sbjct: 194 WKPFKSV-LLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCIVQEINRVPAKRPD 248
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +1
Query: 19 GTPGRGSQHDLHRDRSVSPDYYGSRRFSRISPGRETPDRNLPHYGPRFPPKGSKGAEPEF 198
G+P RG++ D R SP RR S P R+ DR+ R P+ S A
Sbjct: 71 GSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPRRSPAARSAS 130
Query: 199 RSPRV 213
+ RV
Sbjct: 131 PAKRV 135
>AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical
protein K09C6.8 protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 86 DLEDSVVSALDGRRQIGTCPTTDPDSRRREAKV 184
D ED +V+A + TC DPD+ R AK+
Sbjct: 447 DEEDHIVAATMKYNYLATCTFPDPDTNERMAKI 479
>AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical
protein K09C6.7 protein.
Length = 587
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 86 DLEDSVVSALDGRRQIGTCPTTDPDSRRREAKV 184
D ED +V+A + TC DPD+ R AK+
Sbjct: 486 DEEDHIVAATMKYNYLATCTFPDPDTNERMAKI 518
>U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical
protein F54C1.1 protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 208 RVKQLWDRWRNVWLLAWERQRRLHERLAHLKELQRVSNFSWDDWRKRFLKFMNHKK 375
++ ++ D+ R W R +L + L+ L+ W +W R K + HKK
Sbjct: 495 KLDEMMDKMRRNLSRYWTRSEKLSKMLSQLRSFHTGYQQFWLNWVARHGKQIEHKK 550
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.1 bits (62), Expect = 2.8
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Frame = +1
Query: 1 SEERHEGTPGRGSQHDLHRDRSVSPDYYGSRRFS-RISPGRETPDRN-LP--------HY 150
S R G P R S+ RDR SP RR R SPGR +P R+ LP +
Sbjct: 90 SRSRDRGAPRRRSR-TRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRSRLPGPERRDVMPF 148
Query: 151 GPRF-PPKGSK 180
PR PPK +K
Sbjct: 149 NPRHSPPKNAK 159
>Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical
protein Y53C12B.5b protein.
Length = 276
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 62 ARSRPTTTDLEDSVVSALDGRRQIGTCPTTDPDS 163
+R + D+E VV+A DG++ IGT + P S
Sbjct: 24 SRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSS 57
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 62 ARSRPTTTDLEDSVVSALDGRRQIGTCPTTDPDS 163
+R + D+E VV+A DG++ IGT + P S
Sbjct: 157 SRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSS 190
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 85 GSRRFSRISPGRE-TPDRNLPHYGPRFPPKGSKGAEPEFRSP 207
G RF++ P + T R+ YGPR PP G + F +P
Sbjct: 50 GEMRFAKPVPADDWTETRDCTKYGPRCPPSGQGLEKGMFVNP 91
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 259 ERQRRLHERLAHLKELQRVSNFSWDDWRKRFLKFMNHKKSRLTDLFRK 402
ER +H H+K RV + +D WR+ FL +H S L D + K
Sbjct: 123 ERTLTIHGGREHVKYYCRVPSAVFDKWRQSFL---SHCASSLIDAYVK 167
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 68 SRPTTTDLEDSVVSALDGRRQIGTCPTTDPDSRRREA 178
S P+ LE + VS L RR++ T +TD D+ R E+
Sbjct: 1459 STPSDIQLEVAFVSPLVLRRELETLLSTDKDAMRNES 1495
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 62 ARSRPTTTDLEDSVVSALDGRRQIGTCPTTDPDS 163
+R + D+E VV+A DG++ IGT + P S
Sbjct: 157 SRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSS 190
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 273 PPLALPGEQPHVAPPVPQLLH--AGRPELRLCTFASLRRESGSVVGQV 136
PP+A P P PP P L +G P +RL + S++ Q+
Sbjct: 496 PPIATPSSVPPPPPPPPALEQEISGPPTVRLTAVPESNSDRRSLMDQI 543
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +1
Query: 31 RGSQHDLHRDRSVSPDYYGSRRFSRISPGRETPDRNLPHYGPRFPPKGSKGAEPEF 198
RGSQ+ R P YG + S SP + + R P Y P P S G P+F
Sbjct: 70 RGSQYGSSYGR---PSSYGPPQPS-YSPPKSSYGRPEPTYSPYSRPSSSYGRPPQF 121
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 593 PRRSTQSGGSAAMNSFPVDEAATVPVETDPPRRP 492
P R +++GGS+ P T P + PPRRP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,387,987
Number of Sequences: 27780
Number of extensions: 324133
Number of successful extensions: 1454
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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