Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0107
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    98   2e-19
UniRef50_Q5KY30 Cluster: ABC transporter; n=4; Bacillaceae|Rep: ...    35   1.2  
UniRef50_Q30PG7 Cluster: DNA-directed DNA polymerase; n=1; Thiom...    33   3.7  
UniRef50_Q8EKW0 Cluster: ABC transporter permease; n=2; Firmicut...    33   4.9  
UniRef50_UPI00006CB1FA Cluster: Type III restriction enzyme, res...    33   6.5  
UniRef50_P32467 Cluster: Low-affinity glucose transporter HXT4; ...    32   8.6  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 47/61 (77%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
 Frame = +3

Query: 261 IFILVLADPADFVVPQSINKRL--LYKINLKQTKEIRPMGDTSKKKQNCYFYLVLSIFIF 434
           +F+++LADPADFVVPQSINKR   LYKINLKQTK IR  GDTSK+KQNCYFYL+  IFIF
Sbjct: 17  LFMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIF 76

Query: 435 I 437
           I
Sbjct: 77  I 77


>UniRef50_Q5KY30 Cluster: ABC transporter; n=4; Bacillaceae|Rep: ABC
           transporter - Geobacillus kaustophilus
          Length = 275

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +3

Query: 384 KKKQNCYFYLVLSIFIFIYLLNLLWISTNNSRPISKI 494
           +KK   +FY+ L++F+F  +   LW+  ++ +P+S++
Sbjct: 2   QKKAGPFFYVFLALFVFFVMFPFLWVLLSSIKPLSEL 38


>UniRef50_Q30PG7 Cluster: DNA-directed DNA polymerase; n=1;
           Thiomicrospira denitrificans ATCC 33889|Rep:
           DNA-directed DNA polymerase - Thiomicrospira
           denitrificans (strain ATCC 33889 / DSM 1351)
          Length = 444

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 114 IASRHL*FASKAAKMIPVITHDKLNFIVNQKLSLKYYVSLNC*FKKKIEIFILVLADPAD 293
           + +RHL FA    K+IP + H  LN+ ++QK S K         +KK +   L L D AD
Sbjct: 325 VLARHLSFAILKLKVIPTVFHLSLNYEMSQK-SHKNISLCEIFTEKKFDSLCLKLFDEAD 383


>UniRef50_Q8EKW0 Cluster: ABC transporter permease; n=2;
           Firmicutes|Rep: ABC transporter permease -
           Oceanobacillus iheyensis
          Length = 273

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 384 KKKQNCYFYLVLSIFIFIYLLNLLWISTNNSRPISKI 494
           KK+    FY+ L IF+F+ +   +W+   + +P+++I
Sbjct: 2   KKRGTVGFYIFLVIFVFLVMFPFIWVFLTSIKPVNEI 38


>UniRef50_UPI00006CB1FA Cluster: Type III restriction enzyme, res
           subunit family protein; n=1; Tetrahymena thermophila
           SB210|Rep: Type III restriction enzyme, res subunit
           family protein - Tetrahymena thermophila SB210
          Length = 2279

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +3

Query: 153 KMIPVITHDKLNFIVNQKLSLKYYVSLNC*FKKKIEIFILVLA--DPADFVVPQSINKRL 326
           K   ++  D+ N+ +NQ++ LKY+ +L    K+KIE   ++ A  DP+    P++   R+
Sbjct: 82  KKTKIVNFDQ-NYQLNQQVKLKYFFNLK---KQKIEKKDILNAEIDPSILYKPKTNENRI 137

Query: 327 LYKINLKQTKEI 362
           LY+  L +  +I
Sbjct: 138 LYESILSKVNKI 149


>UniRef50_P32467 Cluster: Low-affinity glucose transporter HXT4;
           n=49; Saccharomycetales|Rep: Low-affinity glucose
           transporter HXT4 - Saccharomyces cerevisiae (Baker's
           yeast)
          Length = 576

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = -2

Query: 187 FNLSCVITGIILAALEANYKCRDAIIAVIKRCFRKKLRIILEKLDKLFQYVIG 29
           FN+ C I GIILA L   Y  +  +I V+   +   + I +  ++K +QY IG
Sbjct: 128 FNIGCAIGGIILAKLGDMYGRKMGLIVVVV-IYIIGIIIQIASINKWYQYFIG 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,857,858
Number of Sequences: 1657284
Number of extensions: 8851472
Number of successful extensions: 22446
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22370
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)