Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0107
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 357 LLFVLSLFYTKVFYLSIE 304
           +LF LS+F   V+Y S++
Sbjct: 326 ILFYLSVFVILVYYASLD 343


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 393 QNCYFYLVLSIFIF 434
           +N YF LVLSI ++
Sbjct: 131 KNAYFQLVLSISVY 144


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 338 KLKTNKRNPSDGGHIKEKTK 397
           K +  K++P+DGG+  +K +
Sbjct: 556 KKRKRKQDPADGGNSMKKCR 575


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 338 KLKTNKRNPSDGGHIKEKTK 397
           K +  K++P+DGG+  +K +
Sbjct: 448 KKRKRKQDPADGGNSMKKCR 467


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,391
Number of Sequences: 336
Number of extensions: 2562
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)