Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0107
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92796-6|CAB63232.1|  405|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z83233-4|CAB05758.1|  298|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z92796-6|CAB63232.1|  405|Caenorhabditis elegans Hypothetical
           protein H25K10.7 protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 181 LSCVITGIILAALEANYKCRDAIIAVIKRCFRKKLRIILEKL 56
           L+ ++  II   +   Y+     +   KRCFRK +R +L KL
Sbjct: 360 LNSIVHVIISLVVSTQYRETAKKLFGCKRCFRKIVRTVLSKL 401


>Z83233-4|CAB05758.1|  298|Caenorhabditis elegans Hypothetical
           protein K06B4.4 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -2

Query: 211 DNF*LTIKFNLSCVITGIILAALEANYK---CRDAIIAVI 101
           DNF L + FNL  +I G+    +E   K   C   I+ VI
Sbjct: 29  DNFGLFLSFNLFAIIYGVFFVTIEPESKRWFCYCGILGVI 68


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 405  NNNFVFSLMCPPSDGFLLFVLSL 337
            N++F+  L+CPPS  F  F+L L
Sbjct: 1644 NSDFIPLLVCPPSQEFYEFLLRL 1666


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 405  NNNFVFSLMCPPSDGFLLFVLSL 337
            N++F+  L+CPPS  F  F+L L
Sbjct: 1644 NSDFIPLLVCPPSQEFYEFLLRL 1666


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,669,030
Number of Sequences: 27780
Number of extensions: 223131
Number of successful extensions: 560
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)