Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0103
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0ZNS2 Cluster: ParB; n=1; Sulfolobus islandicus|Rep: P...    34   3.3  
UniRef50_Q14BI8 Cluster: D130029J02Rik protein; n=7; Mammalia|Re...    33   9.9  

>UniRef50_Q0ZNS2 Cluster: ParB; n=1; Sulfolobus islandicus|Rep: ParB
           - Sulfolobus islandicus
          Length = 349

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -1

Query: 534 RFGWRGSSAPVVAKTPINIFRVKYSIVTNIQNRYVQGDTGAQLGLAPSTN-GMSQSGDRR 358
           + GW+   A +V    ++   + YSI  NIQ + +     AQ  L    N G+S++   R
Sbjct: 65  KLGWKDIEANIVNLNDVDA--LVYSITNNIQRKQMDPIDEAQAILKLINNYGLSETEVAR 122

Query: 357 RAGRSPAW 334
           R G+S AW
Sbjct: 123 RLGKSVAW 130


>UniRef50_Q14BI8 Cluster: D130029J02Rik protein; n=7; Mammalia|Rep:
           D130029J02Rik protein - Mus musculus (Mouse)
          Length = 205

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 219 YSERPNHDPPSHFPLDRGRVVFERRNDVTFP----LG*RHEAAMQATGPHAGGRRSVTFH 386
           + ++    PPS  P    R      + ++ P    LG R+E       P + GRR+V+ H
Sbjct: 75  WGQQDGPGPPSPCPSPSPRRTSPAPDILSLPEDPCLGPRNEDGQLRPRPLSAGRRAVSVH 134

Query: 387 *STARARAERPCRL 428
               +A AERP RL
Sbjct: 135 EDQLQAPAERPLRL 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,124,155
Number of Sequences: 1657284
Number of extensions: 13814929
Number of successful extensions: 32301
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32287
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)