Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0102
         (406 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016745-1|AAH16745.1|  299|Homo sapiens capping protein (actin ...    30   3.4  
AK058174-1|BAB71703.1|  299|Homo sapiens protein ( Homo sapiens ...    30   3.4  
AB053259-1|BAB61901.1|  299|Homo sapiens male germ cell-specific...    30   3.4  
BC139906-1|AAI39907.1|  450|Homo sapiens hypothetical protein LO...    29   7.8  
BC050579-1|AAH50579.1|  577|Homo sapiens CCDC138 protein protein.      29   7.8  
AY358345-1|AAQ88711.1|  450|Homo sapiens WLKV305 protein.              29   7.8  
AK125199-1|BAC86081.1|  261|Homo sapiens protein ( Homo sapiens ...    29   7.8  
AK057307-1|BAB71420.1|  665|Homo sapiens protein ( Homo sapiens ...    29   7.8  
AC073415-1|AAX88855.1|  473|Homo sapiens unknown protein.              29   7.8  

>BC016745-1|AAH16745.1|  299|Homo sapiens capping protein (actin
           filament) muscle Z-line, alpha 3 protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 129 NPVCIEQHQILGFQNFFTHEPFFSFFY 49
           NPV +  H ++G   FF H+   SF Y
Sbjct: 68  NPVLLSHHNVMGDYRFFDHQSKLSFKY 94


>AK058174-1|BAB71703.1|  299|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25445 fis, clone TST08542, highly similar to Mus
           musculus mRNA for gsg3. ).
          Length = 299

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 129 NPVCIEQHQILGFQNFFTHEPFFSFFY 49
           NPV +  H ++G   FF H+   SF Y
Sbjct: 68  NPVLLSHHNVMGDYRFFDHQSKLSFKY 94


>AB053259-1|BAB61901.1|  299|Homo sapiens male germ cell-specific
           actin capping protein alpha3 protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 129 NPVCIEQHQILGFQNFFTHEPFFSFFY 49
           NPV +  H ++G   FF H+   SF Y
Sbjct: 68  NPVLLSHHNVMGDYRFFDHQSKLSFKY 94


>BC139906-1|AAI39907.1|  450|Homo sapiens hypothetical protein
           LOC253012 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 318 YLYSKYSV*QVLKKKLEGGPGTQF 389
           +L+ KY   +V+K+KLEG P T++
Sbjct: 358 FLWKKYQPYKVIKQKLEGRPETEY 381


>BC050579-1|AAH50579.1|  577|Homo sapiens CCDC138 protein protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 156 DRMKQLARCNPVCIEQHQILGFQNFFTHEPFFSFFY 49
           D  ++  +  P+  EQ Q + F N   HEPF  F Y
Sbjct: 395 DIQEKCVKLLPLMTEQLQWMPFVNIKLHEPFVKFIY 430


>AY358345-1|AAQ88711.1|  450|Homo sapiens WLKV305 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 318 YLYSKYSV*QVLKKKLEGGPGTQF 389
           +L+ KY   +V+K+KLEG P T++
Sbjct: 358 FLWKKYQPYKVIKQKLEGRPETEY 381


>AK125199-1|BAC86081.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43209 fis, clone FEBRA2015588. ).
          Length = 261

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 156 DRMKQLARCNPVCIEQHQILGFQNFFTHEPFFSFFY 49
           D  ++  +  P+  EQ Q + F N   HEPF  F Y
Sbjct: 79  DIQEKCVKLLPLMTEQLQWMPFVNIKLHEPFVKFIY 114


>AK057307-1|BAB71420.1|  665|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32745 fis, clone TESTI2001511, weakly similar to
           MYOSIN II HEAVY CHAIN, NON MUSCLE. ).
          Length = 665

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 156 DRMKQLARCNPVCIEQHQILGFQNFFTHEPFFSFFY 49
           D  ++  +  P+  EQ Q + F N   HEPF  F Y
Sbjct: 395 DIQEKCVKLLPLMTEQLQWMPFVNIKLHEPFVKFIY 430


>AC073415-1|AAX88855.1|  473|Homo sapiens unknown protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 156 DRMKQLARCNPVCIEQHQILGFQNFFTHEPFFSFFY 49
           D  ++  +  P+  EQ Q + F N   HEPF  F Y
Sbjct: 203 DIQEKCVKLLPLMTEQLQWMPFVNIKLHEPFVKFIY 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,101,824
Number of Sequences: 237096
Number of extensions: 1388933
Number of successful extensions: 2323
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2323
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)