Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0102
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p pro...    28   4.1  
AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB...    28   4.1  
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    27   9.5  

>BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p
           protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 155 STSRMASSDVSESVVMPRDRALSGFP 232
           S SR ASSD SES +M  D   S +P
Sbjct: 58  SASRTASSDESESHIMHADALASAYP 83


>AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB,
           isoform B protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 155 STSRMASSDVSESVVMPRDRALSGFP 232
           S SR ASSD SES +M  D   S +P
Sbjct: 52  SASRTASSDESESHIMHADALASAYP 77


>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
           protein.
          Length = 1788

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -2

Query: 237 DGGNPERALSLGMTTDSETSDDAMRLVDRMKQLARCNPVCIEQHQILGFQNFF 79
           +GG  E A +    T SET      L DR +Q+   N VC+E  ++  F+ +F
Sbjct: 662 EGGCGEHAAA----TSSETRIP-FSLPDRSRQVVALNEVCLEAGKVYKFRIYF 709


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,925,325
Number of Sequences: 53049
Number of extensions: 409960
Number of successful extensions: 844
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)