Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0102
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93396-4|CAB07713.1| 230|Caenorhabditis elegans Hypothetical pr... 33 0.10
U55363-11|AAA97968.1| 299|Caenorhabditis elegans Hypothetical p... 27 3.9
AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical ... 27 6.8
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 26 9.0
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 26 9.0
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 26 9.0
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 26 9.0
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 26 9.0
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 26 9.0
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 26 9.0
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 26 9.0
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 26 9.0
>Z93396-4|CAB07713.1| 230|Caenorhabditis elegans Hypothetical
protein ZC15.6 protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.10
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 388 NWVPGPPSSFFFNTCYTEYLLYKYFC 311
NWVPGP F T +T +LYK+ C
Sbjct: 186 NWVPGPYDLEGFRTGFTHGILYKFSC 211
>U55363-11|AAA97968.1| 299|Caenorhabditis elegans Hypothetical
protein ZC404.10 protein.
Length = 299
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 ILNTYYISIFVTYASVMNAYVKLSSRHFQ-SFH 247
++ Y + VTY S + AY +L+ +FQ SFH
Sbjct: 93 LIQLYLRNFSVTYTSYIKAYTQLTVDYFQISFH 125
>AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical
protein F53A3.1 protein.
Length = 156
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = -2
Query: 345 AILNTYYISIFVTYASVMNAYVKLSSRHFQSFH 247
AIL ++++F ++ +++ + +L+ HF SF+
Sbjct: 42 AILTFSFLALFYSFFTILLRFFELTELHFMSFN 74
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 801 NCPTNIYSLMVECWHENIERRPTFS 825
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 827 NCPTNIYSLMVECWHENIERRPTFS 851
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 801 NCPTNIYSLMVECWHENIERRPTFS 825
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 827 NCPTNIYSLMVECWHENIERRPTFS 851
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 668 NCPTNIYSLMVECWHENIERRPTFS 692
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 801 NCPTNIYSLMVECWHENIERRPTFS 825
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 278 NCPLDISNRFIDVWTEETQRGPCLS 204
NCP +I + ++ W E +R P S
Sbjct: 827 NCPTNIYSLMVECWHENIERRPTFS 851
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -2
Query: 294 MNAYVKLSSRHFQSFHRCLDGGNPERALSLGMTTDSETSDDAMRLVDRMKQL----ARCN 127
+ AY + +S + + ++R L+ + + G+ ++E S+D + +++RM+ RC
Sbjct: 41 LKAY-RRNSLNAEGYYRDLERMHERGLFTTGINYNAEKSEDFLNMIERMQSNRLDDQRCE 99
Query: 126 PVCIEQHQILGFQNFFTHE 70
+ G QN TH+
Sbjct: 100 MPERTHNPTSGHQNEQTHQ 118
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -2
Query: 294 MNAYVKLSSRHFQSFHRCLDGGNPERALSLGMTTDSETSDDAMRLVDRMKQL----ARCN 127
+ AY + +S + + ++R L+ + + G+ ++E S+D + +++RM+ RC
Sbjct: 42 LKAY-RRNSLNAEGYYRDLERMHERGLFTTGINYNAEKSEDFLNMIERMQSNRLDDQRCE 100
Query: 126 PVCIEQHQILGFQNFFTHE 70
+ G QN TH+
Sbjct: 101 MPERTHNPTSGHQNEQTHQ 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,291,231
Number of Sequences: 27780
Number of extensions: 215926
Number of successful extensions: 584
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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