Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0100
         (823 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI016...    35   2.1  
UniRef50_Q184Y9 Cluster: Putative phage protein; n=2; Clostridiu...    33   6.5  

>UniRef50_Q8I3B5 Cluster: Putative uncharacterized protein PFI0160w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0160w - Plasmodium falciparum
           (isolate 3D7)
          Length = 3135

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 174 HATSLIRHCTNVNLFSPIRVFKLMKIYNF 88
           H+TS IRH  N ++F P+ V K+MK +N+
Sbjct: 774 HSTSPIRHEENDHIFYPLSVLKIMKCFNY 802


>UniRef50_Q184Y9 Cluster: Putative phage protein; n=2; Clostridium
           difficile|Rep: Putative phage protein - Clostridium
           difficile (strain 630)
          Length = 249

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -3

Query: 527 NKYAQQCSAGLSKRGARSRLLNYTNNNVDCVNLTNKYIILT 405
           +K A++C  G+S +  RS LL + N        TNKYI++T
Sbjct: 65  SKIAERCGKGVSYQMVRSCLLVFKNAGFLTYETTNKYIVIT 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,059,349
Number of Sequences: 1657284
Number of extensions: 11704868
Number of successful extensions: 21386
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21386
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)