Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0100
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.9  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 25  IYLNNIVKRSEY*QKSSSYRTKVVDFH*FKNSNW 126
           I++N+IVK ++   KS    T V+ F     ++W
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYVLKFEYRSMNSW 429


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 603 FTLSQXQQKSXVKNNLWLKTLIGL*YGLE 689
           +TLS   +   +  N+  KT  G  +GLE
Sbjct: 179 YTLSVKPRDGEIVANITAKTFFGARHGLE 207


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 197 ARTGAPYI*THSSLPELNFLSDLLRKSCLYKRV 295
           A  G P +   S LP    LS  LR  CL  R+
Sbjct: 246 ASFGRPKMTPQSLLPSQTGLSPYLRFGCLSTRL 278


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 25  IYLNNIVKRSEY*QKSSSYRTKVVDFH*FKNSNW 126
           I++N+IVK ++   KS    T  + F     ++W
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSW 429


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 25  IYLNNIVKRSEY*QKSSSYRTKVVDFH*FKNSNW 126
           I++N+IVK ++   KS    T  + F     ++W
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRSGNSW 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,774
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)