Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0097
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 27 9.5
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 181 bits (440), Expect = 4e-46
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 9/196 (4%)
Frame = +2
Query: 11 FEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIK 190
FEEVL +A + VD+ILLGGDLF + PS + T+++R+YCL P+++E LSD
Sbjct: 93 FEEVLQIATEQKVDMILLGGDLFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASV 152
Query: 191 NFSRT----VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDY 358
NF+++ VNY D NLN+ PI +IHGNHDD G+G +++LD+L +GLVN FGK ++
Sbjct: 153 NFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSGKG-LTALDLLHESGLVNLFGKHSNI 211
Query: 359 THVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPHE-TLDWVNLFVLHQN 535
+SP+LL+KG TRLALYG+ +D RL R F + RP+ DW NLFVLHQN
Sbjct: 212 QEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQN 271
Query: 536 H----ADRGHSNYIPE 571
R N++PE
Sbjct: 272 RPRRAMHRSTGNFLPE 287
>Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical
protein F55A11.8 protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 5 IAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 106
+AFEEVL++ +VD + G D+F+ A V+C
Sbjct: 69 VAFEEVLTVQELNEVDAFIYGDDMFEYA--DVHC 100
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 125 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 304
+ ++YC P ++ ++ Q +F T +DP +SY +I +D S +S
Sbjct: 217 VFQRYC---PPGTVFNINQQSCDFQCTT--DDPTTTVSYSTSTITTPQEDDSEYSSTTSA 271
Query: 305 DILSIT 322
D++S T
Sbjct: 272 DVISTT 277
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 164 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 334
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 164 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 334
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 140 CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLD 307
CL P + S R +N +P+L+ S +LSI + +D V S S++
Sbjct: 638 CLAPHPTTNSRRSSLNTLSRRGINRSNPSLSNSVEVLSIRDDAEDDVSNISSKSIE 693
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 140 CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLD 307
CL P + S R +N +P+L+ S +LSI + +D V S S++
Sbjct: 638 CLAPHPTTNSRRSSLNTLSRRGINRSNPSLSNSVEVLSIRDDAEDDVSNISSKSIE 693
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 95 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDD 274
SV +F + C + ELL ++F + NLN+ + S+ G+H+
Sbjct: 137 SVYMLFAYFSVWHATCYFPGKANSELLEYVSEDFQENFGMDSRNLNVIGTLFSV-GSHET 195
Query: 275 PVGQGSVSSL-DILSITGLVNYF 340
+ + S+ +SI ++ +F
Sbjct: 196 TLRAWTAMSIWSTISIASIITFF 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,475,663
Number of Sequences: 27780
Number of extensions: 282316
Number of successful extensions: 629
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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