Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0091
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 119 LPTASEPTASQPTASEPTASQ 181
           LPT +E   +QP  ++PTA +
Sbjct: 69  LPTVTEIQETQPQRTKPTAGK 89


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 119 LPTASEPTASQPTASEPTASQ 181
           LPT +E   +QP  ++PTA +
Sbjct: 60  LPTVTEIQETQPQRTKPTAGK 80


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 644 ASPIPPRSRLCSPT 685
           ASP PP     SPT
Sbjct: 43  ASPAPPEEEAASPT 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.125    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,694
Number of Sequences: 336
Number of extensions: 706
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)