Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0090
(680 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.76
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.76
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.76
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 25 0.76
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 1.0
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 1.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 3.1
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 4.0
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 7.1
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 7.1
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 9.3
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 9.3
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.6 bits (51), Expect = 0.76
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 593 SG*RVIPEFP---QHSSNEYSPPSSGMFSN 513
SG V P+FP +++ N Y PP F N
Sbjct: 23 SGVVVDPKFPPSEEYNQNSYIPPGGDFFGN 52
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.76
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 593 SG*RVIPEFP---QHSSNEYSPPSSGMFSN 513
SG V P+FP +++ N Y PP F N
Sbjct: 23 SGVVVDPKFPPSEEYNQNSYIPPGGDFFGN 52
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.76
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 593 SG*RVIPEFP---QHSSNEYSPPSSGMFSN 513
SG V P+FP +++ N Y PP F N
Sbjct: 23 SGVVVDPKFPPSEEYNQNSYIPPGGDFFGN 52
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 24.6 bits (51), Expect = 0.76
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 593 SG*RVIPEFP---QHSSNEYSPPSSGMFSN 513
SG V P+FP +++ N Y PP F N
Sbjct: 23 SGVVVDPKFPPSEEYNQNSYIPPGGDFFGN 52
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 100 QKFFTHILKCCSVIF 144
++ F+ +L CCSVIF
Sbjct: 92 EEVFSSLLSCCSVIF 106
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 100 QKFFTHILKCCSVIF 144
++ F+ +L CCSVIF
Sbjct: 92 EEVFSSLLSCCSVIF 106
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 417 HEQQTFHYTNTV 382
H QQT HYTN +
Sbjct: 497 HMQQTQHYTNII 508
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 560 HSSNEYSPPSSGMFSNFLAPGLGPL 486
H SN +P S F G GPL
Sbjct: 13 HESNTSTPVSKSAFIELQQHGYGPL 37
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 586 NE*FRNFHSIRVMST 542
+E R FH IR MST
Sbjct: 379 DELLRRFHEIRYMST 393
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 326 TLLHCDAPHLEIQMHRV 276
T+ CDA +LEI+ R+
Sbjct: 775 TVCTCDAKYLEIKCKRI 791
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 106 FFTHILKCCSVIF 144
F H+L CC+ IF
Sbjct: 176 FTMHLLFCCAFIF 188
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 392 PTLCRAARRGVGPAMTGSRLTTTLL 318
P L RRG GPA + L L+
Sbjct: 322 PQLAGGGRRGPGPARSRRHLPAHLV 346
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,421
Number of Sequences: 336
Number of extensions: 3625
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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