Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0089
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.3  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +3

Query: 114 MRAFVV--LACVAMAYGRPEPPVGYSY 188
           MR FV+  +ACV++A  RPE      Y
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKY 27


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -3

Query: 545 DLVMFLGWSHSRDTRKSLLNWFWGRYVN 462
           D V    W  ++   K  +  FW +Y N
Sbjct: 371 DEVNLTCWQDTKSANKIAMKLFWAQYTN 398


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 665 IRLLFRLLNQHIYECLLFVLWLDRNYGGSRSGRSWGLDEDDLVMFLG 525
           I + FR+   ++   +L  + +DR Y   +      LD  D  M LG
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRALDRRDKFMLLG 174


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 665 IRLLFRLLNQHIYECLLFVLWLDRNYGGSRSGRSWGLDEDDLVMFLG 525
           I + FR+   ++   +L  + +DR Y   +      LD  D  M LG
Sbjct: 128 IMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRALDRRDKFMLLG 174


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -3

Query: 677 WDNNIRLLFRLLNQHIYECLLFVLWLDRNYGGSRSGRSWGLDEDDLVMFLGWSHSRDTRK 498
           W N+IR      N  + +C + V    R+Y     G  W LD     +F+G +  +  R+
Sbjct: 127 WQNSIRH-----NLSLNKCFVKV---PRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRR 178

Query: 497 S 495
           S
Sbjct: 179 S 179


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 468 VPPPEPVEQRLPRIPAVAPPQKHY 539
           +PPP P E     IP   P  K +
Sbjct: 213 IPPPPPEEDDDSNIPQNNPKNKQH 236


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 42  LIGY*INYHRVS 77
           L+GY INY R+S
Sbjct: 112 LLGYSINYRRIS 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,194
Number of Sequences: 336
Number of extensions: 2253
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)