Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0089
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 32 0.44
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 0.76
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 0.76
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.3
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 29 3.1
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 7.1
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 7.1
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 28 7.1
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 28 7.1
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical... 27 9.4
AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical... 27 9.4
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
ST +T S TES+ TS T + ESTTE+ S S + + T + +T+
Sbjct: 189 STTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTT-ESTTESTTESTSTSTD 247
Query: 257 SNSSVSAA 234
S ++ S +
Sbjct: 248 STTTESTS 255
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
+T ST S TES+ TS T + ESTTE+ S S + ++ + + TT
Sbjct: 209 TTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTE 268
Query: 257 SNS 249
S +
Sbjct: 269 STT 271
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETES 333
ST ST + TES+ TS T + ESTTE+ S
Sbjct: 241 STSTSTDSTTTESTSTSTDSTTTESTTESTTESTS 275
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 257 SNS 249
S
Sbjct: 241 EGS 243
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 257 SNS 249
S
Sbjct: 241 EGS 243
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 257 SNS 249
S
Sbjct: 241 EGS 243
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 437 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 258
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 257 SNS 249
S
Sbjct: 241 EGS 243
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 410 ATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAAD 231
A + + SEA + A ESTTE+ SA K T N ++VS A
Sbjct: 18 AADGTTKSEASSTTVATSESTTESTKTTTASAIKETVKEEVKEKEGPETRNETAAVSRAK 77
Query: 230 R 228
R
Sbjct: 78 R 78
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -3
Query: 407 TESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADR 228
TES + + A GE+ E E +R G +K + T S S SA ++
Sbjct: 447 TESEVAIKTDYWMKANGEAMKEIEEKKRERELNGGVKKKKPRSNRKTDTTSTSVASAVEK 506
Query: 227 GRAE 216
AE
Sbjct: 507 VIAE 510
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 425 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 282
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 457 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 502
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 425 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 282
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 460 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 505
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 437 SSCTETHLCSRTSPRTS*AKTSSYPCCGSTPETLQDHLHQGPNSSHSYCPHNSYPTTKRR 616
S+ T T + S SP +S A+ SS P ST Q Q P S+ + P+T+
Sbjct: 937 SAATVT-VSSSQSPTSSPAQQSSTPAGSSTVTVQQSSSFQSPQSTTQIGSSTTVPSTQAP 995
Query: 617 EDT 625
T
Sbjct: 996 SST 998
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 127 WYSPVWLWPMAALNLQWDTATPLP 198
W +W++PMA + L W T LP
Sbjct: 98 WNQLLWIYPMALVQLIWVPDTELP 121
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 506 YPCCGSTPETLQDHLHQGPNSSHSYCPHNSYPTTK 610
YP CGS E ++ + N+ YCP Y K
Sbjct: 222 YPNCGSIQEVIEFIENGNRNAQPKYCPDEIYKLMK 256
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 437 SSCTETHLCSRTSPRT-S*AKTSSYPCCGSTPETLQDHLHQGPNSSHSYCPHNS 595
SS + +R SP T S +++SS S TLQD + + PN + CP S
Sbjct: 329 SSAPASTCSTRWSPMTVSTSESSSTSESSSGMPTLQDPIRRCPNEPVAQCPSRS 382
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = -3
Query: 509 DTRKSLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETE 336
DT K+L++ + +++N D+FL++ T + E + T + + + T + E
Sbjct: 250 DTLKNLVHKY-SQFINFDIFLWQSKTEMVEEAVEEEPATTEDGAVEEEKEEKKTKKVE 306
>AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical
protein Y95B8A.12a protein.
Length = 621
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 494 KTSSYPCCGSTPETLQDHLHQGPNSSHSY 580
+TSS CC S + H+ PN SH +
Sbjct: 47 ETSSQGCCSSDNVIIVPHVQISPNESHLF 75
>AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical
protein Y95B8A.12b protein.
Length = 613
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 494 KTSSYPCCGSTPETLQDHLHQGPNSSHSY 580
+TSS CC S + H+ PN SH +
Sbjct: 47 ETSSQGCCSSDNVIIVPHVQISPNESHLF 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,960,631
Number of Sequences: 27780
Number of extensions: 205978
Number of successful extensions: 886
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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