Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0089
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23230.1 68414.m02906 expressed protein 34 0.076
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 32 0.31
At5g28120.1 68418.m03396 hypothetical protein 30 1.2
At3g30816.1 68416.m03949 hypothetical protein 30 1.6
At2g06860.1 68415.m00768 Ulp1 protease family protein contains P... 30 1.6
At5g23850.1 68418.m02800 expressed protein 29 2.2
At4g05300.1 68417.m00803 hypothetical protein 29 2.8
At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein ... 29 3.8
At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)... 28 5.0
At5g28110.1 68418.m03395 hypothetical protein 28 6.6
At4g21900.1 68417.m03166 MATE efflux family protein similar to r... 28 6.6
At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidops... 28 6.6
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 28 6.6
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 28 6.6
At5g39080.1 68418.m04728 transferase family protein similar to a... 27 8.7
At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar t... 27 8.7
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 27 8.7
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 27 8.7
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -3
Query: 470 YVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVS 318
Y+N D FL + + +SA E+S++ Q AAA G S T ++S+ VS
Sbjct: 126 YINWDTFL----PSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVPVS 172
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 32.3 bits (70), Expect = 0.31
Identities = 27/120 (22%), Positives = 44/120 (36%)
Frame = -3
Query: 605 WLDRNYGGSRSGRSWGLDEDDLVMFLGWSHSRDTRKSLLNWFWGRYVNIDVFLYKRSTRV 426
W N GGS S G D + GW S D + NW WG + ST
Sbjct: 45 WRSGNSGGSSGSGSGGSDSNSGGSSWGWGWSSDGTDT--NWGWGSSSGSNHSSGTGSTHN 102
Query: 425 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSS 246
+ SS T + G + + R + G ++ ++ GS ++++ S+
Sbjct: 103 GHSSGSNHSSATGSTHNGHTSTGSNHSSGNGSRHNGYSSG--SNHSSSTGSNHSSSTGST 160
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -3
Query: 443 KRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASR 291
++S R STRISA+E + S KGES T+ RR++ K + +R
Sbjct: 342 EKSVRGSTRISASEHTQGSPIDAILPIKGES-TKNGVTRRITNGKVHGGNR 391
>At3g30816.1 68416.m03949 hypothetical protein
Length = 342
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 443 KRSTRVSTRISATESSITSEAQTAAAAKGESTTE--TESIRRVSAAKGNAASRK 288
K+S R STRISA+E + S KGEST T I +GN +++
Sbjct: 179 KKSVRGSTRISASEHTQGSPMDAILPIKGESTKNGVTRWITNGKVHRGNRWTKR 232
>At2g06860.1 68415.m00768 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 938
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 440 RSTRVSTRISATESSITSEAQTAAAAKGESTT--ETESIRRVSAAKGNAASRK 288
+S R STRISA+E + S KGEST E+ RR KG++ +
Sbjct: 843 KSVRGSTRISASEHTQGSPMDAILPVKGESTKNGHGETDRRSVRPKGDSTDNQ 895
>At5g23850.1 68418.m02800 expressed protein
Length = 542
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 548 LHQGPNSSHSYCPHNSYPTTKRRED 622
LH N + + CP N YPTT ED
Sbjct: 104 LHCSANETTASCPSNKYPTTTSFED 128
>At4g05300.1 68417.m00803 hypothetical protein
Length = 387
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -3
Query: 443 KRSTRVSTRISATESSITSEAQTAAAAKGESTT--ETESIRRVSAAKGNAASRKAT*GSR 270
++S R STRISA+E + S KGEST E+ +R KG++ + R
Sbjct: 301 EKSVRGSTRISASEHTQGSPMDAILPVKGESTKNGHGETDQRSVRPKGDSTDNQRE-SLR 359
Query: 269 MTTNSNSSVSAADRGRAE 216
+ V A + +A+
Sbjct: 360 WEPMDKTDVGPASKPKAD 377
>At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}; contains Pfam profile:
PF00076 RNA recognition motif (aka RRM, RBD, or RNP
domain)
Length = 483
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPRIPAVAP 524
P++Q Y+H PPP+P Q P P++ P
Sbjct: 337 PMLQ--YYMHPPPPQPPHQDRPFYPSMDP 363
>At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)
family protein low similarity to Swift [Xenopus laevis]
GI:14164561; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00533: BRCA1 C
Terminus (BRCT) domain
Length = 991
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 518 GSTPETLQDHLHQGPNSSHSYCPHNSYPTTKRREDTRI 631
G + +QDHL PN +H + + +YP K ++ I
Sbjct: 871 GKSAARIQDHLR--PNGAHRWHNYKTYPNIKELDEAAI 906
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 443 KRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASR 291
++S R S RISA+E + S KGES T+ RR++ K + +R
Sbjct: 342 EKSVRGSIRISASEHTQGSPIDAILPIKGES-TKNGVTRRITNGKVHGGNR 391
>At4g21900.1 68417.m03166 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
MatE
Length = 1094
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 428 VSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 282
VS+ IS ESS+T+ A+ AAAKG+ + ++ + A G + R T
Sbjct: 576 VSSGISPNESSVTAVAR-LAAAKGDGDYAFKLVKDLVAVGGVSVPRLRT 623
>At3g56140.1 68416.m06240 expressed protein At2g40400 - Arabidopsis
thaliana, EMBL:AC007020
Length = 745
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -3
Query: 491 LNWFWGRYVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVS 318
LN ++G ID+ RST + T+ S S SEA + ++TTE ESI +++
Sbjct: 689 LNSYFGTQQWIDL---ARSTGLQTQKSIPASKEISEALEEPTVECDTTTEEESIDKLN 743
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 473 SPRTS*AKTSSYPCCGSTPETL---QDHLHQGPNSSHSYCPHNSY 598
SP S A TS Y C +PE L +L QG S P NS+
Sbjct: 401 SPSHSSASTSPYRCFQKSPEVLPAFMSNLRQGLQSQLLSSPSNSH 445
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 471 PPPEPVEQRLPRIPAVAPPQK 533
PPP P + P P APPQK
Sbjct: 32 PPPPPPHHQAPLPPLEAPPQK 52
>At5g39080.1 68418.m04728 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 463
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = +3
Query: 72 VSSKRISLVSSKH-KMRAFV-----VLACVAMAYG-RPEPPVGYSYS 191
VSS S SSK ++ FV VL C+ A G P PVGY++S
Sbjct: 271 VSSSSSSTSSSKELRLSTFVIVYSYVLVCIIRARGGEPHRPVGYAFS 317
>At5g05320.1 68418.m00573 monooxygenase, putative (MO3) similar to
GI:3426064; identical to cDNA monooxygenase 3, partial
GI:3426065
Length = 406
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 386 EAQTAAAAKGESTTETESIRRV-SAAKGNAASRKAT*GSRMTTNSNSSVSAADRGR 222
EA A KGE+ E ES RR+ K A SRK +TT+ RG+
Sbjct: 319 EAMKAKNMKGETEDENESYRRIEDGLKKYAGSRKWRSIDLITTSYTVGFIQQSRGK 374
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = -3
Query: 413 SATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNS---SV 243
S+ ESS +S+ + K +STT + R +KG + +KA + +TNS+S S
Sbjct: 251 SSYESSSSSDGKHR---KRKSTTRHKGRRGERKSKGRSGKKKARPDRKPSTNSSSDTESS 307
Query: 242 SAADRG 225
S++D G
Sbjct: 308 SSSDDG 313
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 86 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 120
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 114 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 148
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 142 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 176
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 170 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 204
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 198 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 232
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 226 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 260
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 254 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 288
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 282 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 316
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 310 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 344
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 438 PLVQKHIYVHVPPPEPVEQRLPR--IPAVAPPQKHY 539
P +KH YV+ PP PV+ P + PP+KHY
Sbjct: 338 PPPKKH-YVYKSPPPPVKHYSPPPVYHSPPPPKKHY 372
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,469,958
Number of Sequences: 28952
Number of extensions: 201168
Number of successful extensions: 1093
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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