Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0086
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    29   0.18 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.1  

>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
 Frame = -3

Query: 437 STRVSTRISATESSITSEAQTAAAAK------GESTTETESIRRVSAAKGNAASRKAT*G 276
           ++  +T  + T ++ TSEA T AAA        ++TT T      + A+  ++S  +T  
Sbjct: 67  TSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTTT 126

Query: 275 SRMTTNSNSSVSAAD 231
               T + +S + AD
Sbjct: 127 EAAATTTAASETTAD 141


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 518  GSTPETLQDHLHQGPNSSHSYCPHNSYPTTKRRED 622
            G  PETL +H+ Q P +  + C      T+  ++D
Sbjct: 1046 GVVPETLLEHMLQSPENWSNVCEATKRITSALQQD 1080


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 497 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 390
           S L+WF  RY N  + + + ST V   I+ T +++T
Sbjct: 614 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 647


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 497 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 390
           S L+WF  RY N  + + + ST V   I+ T +++T
Sbjct: 614 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 647


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 497 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 390
           S L+WF  RY N  + + + ST V   I+ T +++T
Sbjct: 592 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 625


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 518  GSTPETLQDHLHQGPNSSHSYCPHNSYPTTK 610
            G  PETL+ H+ Q P +  + C      T+K
Sbjct: 986  GVLPETLEAHMLQSPTNWSNVCEAAKRITSK 1016


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -3

Query: 383  AQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADRGRA 219
            + T  A    STT   S   VS+A  N+A       +  T+N+N+++   D G A
Sbjct: 1866 SMTVPATSSVSTTGGSSSTMVSSAVSNSAVATGPAVNNGTSNNNNAL-GEDGGNA 1919


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,994
Number of Sequences: 2352
Number of extensions: 9757
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)