Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0084
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE151...    33   8.9  
UniRef50_Q4YCF5 Cluster: BIR protein, putative; n=4; Plasmodium ...    33   8.9  

>UniRef50_Q8I3G5 Cluster: Putative uncharacterized protein PFE1515w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE1515w - Plasmodium falciparum (isolate 3D7)
          Length = 1419

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 443 KSEYNNFTEAMDQKQNVISVDCNELMSLSFIVKLNICLIAL*LSEASTAIIQIFNSIVLI 622
           KS Y    E      N+  +  N++ +  + +KLNI ++       S  IIQIFNS +LI
Sbjct: 746 KSFYYEIDEENQTCSNIKEIISNKINAEFYHLKLNILIL-------SCIIIQIFNSFILI 798

Query: 623 ATRNRF 640
              N F
Sbjct: 799 LISNNF 804


>UniRef50_Q4YCF5 Cluster: BIR protein, putative; n=4; Plasmodium
           (Vinckeia)|Rep: BIR protein, putative - Plasmodium
           berghei
          Length = 339

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = +2

Query: 383 RYYTDI--KHITKETANVQIVLKSEYNNFTEAMDQKQNVISVDCNELMSLSFIVKLNICL 556
           +Y+ DI  K+  K T ++  V  + YN++ + +DQK+N+IS+D + ++S  + V + +C+
Sbjct: 104 QYFYDIYIKNHEKYTNSITGV-DAYYNSYKDLIDQKKNLISMDMS-IISKLYDVFIKLCM 161

Query: 557 IAL*LSE 577
           + +   E
Sbjct: 162 MHIEFDE 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,079,283
Number of Sequences: 1657284
Number of extensions: 9120499
Number of successful extensions: 17103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17100
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)