Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0084
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 450 SDLRTICTLAVSFVICLMSV 391
           S  +T CTL  + V C +++
Sbjct: 401 SKTKTFCTLVTALVYCSLAI 420


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 627 VAINTIELKICIIAVDASDN*RAIKQIFNFTMNDSDINSLQSTLITFC 484
           + +NTI L    + +      R I       +NDS   +   T +TFC
Sbjct: 180 LVVNTINLTFLTLLMILEGRFRVINDGIQALINDSRKVTRFPTELTFC 227


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 270 YFWTDLICLLLKSANVIHNLI*VLFKQNII 359
           Y+W ++ CL L    +  N      +Q I+
Sbjct: 55  YYWLNVCCLNLSIVTIFFNFATKKLEQFIV 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,485
Number of Sequences: 336
Number of extensions: 2752
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)