Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0081
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    36   3e-04
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    31   0.008
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    31   0.008
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.88 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.2  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 491 LGSDEPGPRVAIAVQCPVCDEEFHNNITLMTHIYSHVVEP 610
           +G     P + +  QCPVC ++F N + L  HI  H  EP
Sbjct: 182 MGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEP 221



 Score = 24.6 bits (51), Expect = 0.67
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
           +C +C   F     L TH+  H  +PP
Sbjct: 164 KCKICGRAFTTKGNLKTHMGVHRAKPP 190


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
           +CPVCD  F  + ++ TH+ +H  E P
Sbjct: 51  RCPVCDRRFSQSSSVTTHMRTHSGERP 77


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 533 QCPVCDEEFHNNITLMTHIYSHVVEPP 613
           +CPVCD  F  + ++ TH+ +H  E P
Sbjct: 307 RCPVCDRRFSQSSSVTTHMRTHSGERP 333


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 536 CPVCDEEFHNNITLMTHIYSH 598
           CP+C++ F  +  L  H+ +H
Sbjct: 377 CPICNKRFMRSDHLAKHVKTH 397


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 506 PGPRVAIAVQCPVCDEEFHNNITLMTHI 589
           P   V+  + C VCD+ F +   L  H+
Sbjct: 540 PSSHVSAVLTCKVCDQAFSSLKELSNHM 567



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 424 EEHQEGDPTRGDRVDGE 474
           E  +EG P  GD+++G+
Sbjct: 15  EGGEEGSPEEGDKLEGD 31


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 480 TSGSSAVTSPDP 515
           TS SSA+ SPDP
Sbjct: 222 TSSSSALESPDP 233


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 206 APSSCGRACRDPFP 165
           +P  C RACR+  P
Sbjct: 104 SPDECARACREGEP 117


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 206 APSSCGRACRDPFP 165
           +P  C RACR+  P
Sbjct: 104 SPDECARACREGEP 117


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 533 QCPVCDEEFHNNITLMTHIYSH 598
           QC  CD    N   L +H+ SH
Sbjct: 260 QCNKCDYTCVNKSMLNSHMKSH 281


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 533 QCPVCDEEFHNNITLMTHIYSH 598
           QC  CD    N   L +H+ SH
Sbjct: 18  QCNKCDYTCVNKSMLNSHMKSH 39


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/61 (21%), Positives = 28/61 (45%)
 Frame = +2

Query: 431 IKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEFHNNITLMTHIYSHVVEP 610
           + +++Q E +  + KYY G+    +   R  +A+     D  F N+I     + +  ++ 
Sbjct: 358 VDRDLQDEVSQKIRKYYLGEKKLSKKTFRELVAM---FSDRIFINDIVKTAKLMAKSMKS 414

Query: 611 P 613
           P
Sbjct: 415 P 415


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/61 (21%), Positives = 28/61 (45%)
 Frame = +2

Query: 431 IKKEIQPEETVSMEKYYFGKLGSDEPGPRVAIAVQCPVCDEEFHNNITLMTHIYSHVVEP 610
           + +++Q E +  + KYY G+    +   R  +A+     D  F N+I     + +  ++ 
Sbjct: 358 VDRDLQDEVSQKIRKYYLGEKKLSKKTFRELVAM---FSDRIFINDIVKTAKLMAKSMKS 414

Query: 611 P 613
           P
Sbjct: 415 P 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,687
Number of Sequences: 336
Number of extensions: 1527
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)