Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0080
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    31   0.011
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.55 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.96 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.0  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = +1

Query: 4    QRTNDITEDDFVILTGLEPGQLYEVKVTVHDGHYFSTSELRTVDTSIDGPIVKPDEKI 177
            Q +N++      +L  L+P   Y ++VT H+   F+ +E      ++ G  + P  +I
Sbjct: 1538 QVSNNVKLGQNFVLLDLDPACWYHLRVTAHNNAGFNVAEYEFATLTVTGGTIAPAREI 1595


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 84  HGARRPLLQHQRAADGRHLHRRTDSEAGREDR 179
           H  R  LL+ +R  D   +   + SEAG EDR
Sbjct: 15  HDGRVKLLEGRRVVDCDDVSSVSQSEAGDEDR 46


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 542 ACEAESGWPDVGGRRFRPY-CPM 477
           +C+ + GW +V  R+ R Y CP+
Sbjct: 709 SCDCDLGWVEVWERKRRQYLCPV 731


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 110 LK*WPSCTVTLTSYSWPGSSPVRITKSSSV-MSL 12
           +K W    V + SY WP     R+    +V MSL
Sbjct: 130 MKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSL 163


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 110 LK*WPSCTVTLTSYSWPGSSPVRITKSSSV-MSL 12
           +K W    V + SY WP     R+    +V MSL
Sbjct: 130 MKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSL 163


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 110 LK*WPSCTVTLTSYSWPGSSPVRITKSSSV-MSL 12
           +K W    V + SY WP     R+    +V MSL
Sbjct: 130 MKDWSCVEVMMASYGWPAGLNRRLNVLLAVFMSL 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 425 IESVSLSGPGLVPLLIEWRDLLSNGCVYS 339
           I SV ++  GLV +   W   L N C +S
Sbjct: 719 ITSVMIAVSGLVYIATVWICTLMNRCKFS 747


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -2

Query: 110 LK*WPSCTVTLTSYSWPGSSPVRITKSSSVMSLV 9
           +K W     T  SY WP     ++   + V  L+
Sbjct: 113 VKDWCVVDATFASYGWPKGLNKKLNTLTVVFMLI 146


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -2

Query: 110 LK*WPSCTVTLTSYSWPGSSPVRITKSSSVMSLV 9
           +K W     T  SY WP     ++   + V  L+
Sbjct: 113 VKDWCVVDATFASYGWPKGLNKKLNTLTVVFMLI 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,929
Number of Sequences: 336
Number of extensions: 2106
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)