Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0080
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 32 0.47
05_04_0142 - 18372751-18373338 31 1.1
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 30 1.4
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 30 1.9
08_02_0906 - 22467815-22468440,22468830-22468959,22469773-224698... 30 1.9
06_03_0455 + 20978658-20978677,20979104-20979608 30 1.9
05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363... 30 1.9
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 30 1.9
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119... 30 1.9
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248... 30 1.9
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 29 3.3
07_03_0103 - 13425411-13425713,13425874-13425974,13426410-134264... 29 3.3
07_01_1171 - 11070159-11070362,11070554-11070747,11072346-11072541 29 3.3
06_01_0231 + 1775861-1776157 29 3.3
05_04_0219 + 19150612-19150878 29 3.3
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 29 4.3
06_02_0181 - 12694304-12694398,12694512-12695547 29 4.3
02_05_0533 - 29818276-29818866 28 5.7
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 28 7.6
04_03_0458 + 16141094-16141266,16141354-16141402,16143475-161437... 28 7.6
03_05_1113 - 30493597-30494385 28 7.6
02_03_0064 + 14607975-14608925 28 7.6
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 28 7.6
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 28 7.6
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 31.9 bits (69), Expect = 0.47
Identities = 27/65 (41%), Positives = 29/65 (44%)
Frame = +3
Query: 9 DQRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRG 188
DQ G+ R GAGARPA RG+ RR RAA G T S R RD G
Sbjct: 653 DQAAGAGQRRGRRGAGARPAARGRCRRGRR-----GRAAGG-----ATVSAEARAPRDGG 702
Query: 189 LVHRR 203
RR
Sbjct: 703 AATRR 707
>05_04_0142 - 18372751-18373338
Length = 195
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 439 DGETAGMNEDGSFIGQYGRKRRPPTSGQPDSAS 537
DGE AG +G G R+R+PPTSG S+S
Sbjct: 14 DGEGAGAGGEGR--GALRRRRQPPTSGSAASSS 44
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +3
Query: 12 QRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGL 191
Q H R R P G++ RG+G R + R+ H R GR DRDR
Sbjct: 640 QNHGRSPSRSPSPDGSKRVRRGRGFTHRYSFARQYRSPSPDHSFR----YGGRGDRDRPN 695
Query: 192 VHRR 203
+RR
Sbjct: 696 RYRR 699
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 6 ADQRHHRGRLRDPDGAGARPAVRGQGH---GARRP--LLQHQRAADGRHLHRR 149
AD+R RGR R P +P VRGQ G RRP + Q + GR L RR
Sbjct: 301 ADRRDARGRRRAP----RQPGVRGQDRVDAGERRPERVRQRRHREVGRRLDRR 349
>08_02_0906 -
22467815-22468440,22468830-22468959,22469773-22469852,
22470331-22470678,22470775-22470936,22471817-22471928
Length = 485
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 509 QHPASRTQPRKHLQRSFKNHFPRSIISLACIFLKTFA*STLKI 637
QH AS QP+++ + K+ R ++SL +FLK STL +
Sbjct: 227 QHVASHLQPQEYCTKQQKDLDERRLLSLDSLFLKAIL-STLNV 268
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 12 QRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGR 134
QR R GA ARPAV G+ RR ++ + AADGR
Sbjct: 53 QRAAGAEPRPEAGAKARPAVGGRRGRRRRRVVGAEAAADGR 93
>05_01_0458 +
3630218-3630274,3630383-3630507,3630635-3630710,
3630884-3630985,3631075-3631290,3632217-3632297,
3633152-3633235,3633405-3633509,3634338-3634516,
3634681-3634765,3634889-3635090,3635165-3635234,
3635353-3635422,3635745-3635834,3636020-3636088,
3636520-3636618,3636804-3636914
Length = 606
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Frame = -2
Query: 476 KEPSSFMPAVSPS--PYSAIESVSLSGPGLVPLLI--EW-----RDLLSNGCVYSWKP 330
K P++ A++ + P IES S++GPG V +++ W +D+L NG + +W P
Sbjct: 79 KNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQDMLVNG-IKTWAP 135
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 54 GARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEA 164
G +P+ RG+G GA++ + + +A GR ++T+S A
Sbjct: 465 GRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPA 501
>02_01_0174 -
1193696-1193726,1193822-1194175,1194307-1194542,
1194629-1194741,1195963-1196161,1196427-1196513
Length = 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +3
Query: 9 DQRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAAD--GRHLHRRTDSEAGREDRD 182
D+R +RGR P G G G G R + R D HR + G + +
Sbjct: 247 DRRDYRGRSASPYGRGRERGSPDYGRGRERGSPDYGRGGDRGSPDYHRGASPQGGNKGDE 306
Query: 183 RG 188
RG
Sbjct: 307 RG 308
>01_02_0091 - 11023912-11024017,11024112-11024185,11024478-11024834,
11024938-11025166,11025468-11025559,11026099-11026326,
11027108-11027356,11027429-11027471,11027589-11027836,
11027922-11028035,11028122-11028322,11028417-11028593,
11028725-11028853,11029210-11029287,11029369-11029464,
11029563-11029634,11031549-11031677,11032105-11032220,
11033048-11033204,11033343-11033426,11033513-11033574,
11034901-11035067,11035162-11035226,11035315-11035371,
11035547-11035633,11036638-11036703,11036810-11036908
Length = 1193
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 LTGLEPGQLYEVKVTVHDGHYFSTSELRTVD-TSID 147
L GL PG +Y V+V D H F+ E + + SID
Sbjct: 980 LRGLVPGSIYSVRVVAKDDHRFAAVERASPEYVSID 1015
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Frame = +1
Query: 259 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRH-SMSSGTKPGPESD-TDS--- 423
R R + HD GR D D YT D + RH + S P+ D +DS
Sbjct: 330 RRRRQEMPKHDEYSRRGRSDADDRRGRHYTPSDDRRGRHYTPSDHNSAYPKHDSSDSRHR 389
Query: 424 MAEYGDG-ETAGMNEDGSFIGQYGRKRRPPT 513
EYG G T+ + +G + + R PT
Sbjct: 390 RPEYGRGNSTSELGSEGQRRQESQQGRNGPT 420
>07_03_0103 -
13425411-13425713,13425874-13425974,13426410-13426471,
13426951-13427123
Length = 212
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +3
Query: 27 GRLRDPDGAGARPAVRGQG---HGARRPLLQHQRA 122
G R AGA P R +G HG RRP L+ +A
Sbjct: 22 GAARRQSAAGAGPCYRAEGGHCHGGRRPTLRQAKA 56
>07_01_1171 - 11070159-11070362,11070554-11070747,11072346-11072541
Length = 197
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 361 NKSRH--SMSSGTKPG-PESDTDSMAEYGDGETAGMNEDGSFIGQYGRKRRPPTSGQP 525
+KS H + +KP PE + ++E G +ED Y ++RPP G P
Sbjct: 61 SKSAHDSTFKLSSKPREPEEEEIQLSEISIEFEDGHSEDNEITSNYSCQKRPPAPGSP 118
>06_01_0231 + 1775861-1776157
Length = 98
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 39 DPDGAGARPAVRGQGHGARRPLLQHQRAADGR 134
D A A A G G GA RP Q AA+GR
Sbjct: 40 DNAAASAAAAAEGTGRGATRPAEQATAAAEGR 71
>05_04_0219 + 19150612-19150878
Length = 88
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 424 MAEYGDGETAGMNEDGSFIGQYGRKRR 504
++E GDG G+ DG +G+ GR+RR
Sbjct: 58 LSEGGDGLGLGVGGDGGKLGEEGRRRR 84
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +3
Query: 12 QRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGL 191
+R R R RD D R +GH R +R D R D E +RDRG
Sbjct: 363 ERDRRDRDRDRDRGRDYERDRDRGHDRHR-----ERGRD-----RERDYERASHERDRGH 412
Query: 192 VHRRD 206
+H RD
Sbjct: 413 MHERD 417
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 144 YGGVDRPQLAGAEVVAVVHRDLDLVQLAGLQPRQDHE 34
YGG D LAG +V VV ++ +Q+AGL HE
Sbjct: 257 YGGADGGPLAGVKVKNVVSGEVSDLQVAGLFFAIGHE 293
>02_05_0533 - 29818276-29818866
Length = 196
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +3
Query: 90 ARRPLLQHQRAADGRHLHRRTDSEAGREDRDRGLVHR 200
A R L H AD LHRR D EAGR R + R
Sbjct: 29 ASRTALSH--VADVHTLHRRVDPEAGRLQAARSITVR 63
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 97 GHYFSTSELRTVDTSIDGPIVKPDEKI-ATAGW 192
G + E++ I G ++PD KI ATAGW
Sbjct: 299 GAFILRKEIKLERPGIAGTAIRPDNKIAATAGW 331
>04_03_0458 +
16141094-16141266,16141354-16141402,16143475-16143750,
16143940-16144050
Length = 202
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 27 GRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTDS 158
G+LR P+ GA A RG G G R + RAA G+ + TDS
Sbjct: 132 GQLR-PERGGAGRAPRGGGDGRARVVGGGGRAARGQVCYGPTDS 174
>03_05_1113 - 30493597-30494385
Length = 262
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 557 TSVANACEAESGWPDVGGRRFRPYC 483
TSV +A A + PD GG + RP+C
Sbjct: 84 TSVIDAAAAFAPSPDAGGSKRRPWC 108
>02_03_0064 + 14607975-14608925
Length = 316
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +1
Query: 349 HPLDNKSRHSMSSGTKPGPESDTDSMAEYGDGETAGMNEDGSFIGQYGRKRRPPTSGQPD 528
H L K+ GT PG + ++ D E +G N GS PP+ G PD
Sbjct: 31 HQLHLKTEDDQGGGT-PGVFGSRGTKRDHDDDENSG-NGHGSGGDGGDLALVPPSGGGPD 88
Query: 529 SASQAFAT 552
A AT
Sbjct: 89 GAGSESAT 96
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 12 QRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAA 125
Q R +LR P AG P G GHG P Q Q +
Sbjct: 61 QHSRREKLRFPPDAGDSPPPHGHGHG-HAPQQQQQHGS 97
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 491 PYCPMKEPSSFMPAVSPSPYSAIESVSLSGPGL-VPLLI 378
P+ F+P+ SPSP SA S S P L VPL++
Sbjct: 18 PFHAFASTLPFLPSPSPSPTSASPSPSPPAPHLAVPLIL 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,062,756
Number of Sequences: 37544
Number of extensions: 289544
Number of successful extensions: 1386
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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