Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0079
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p pro...    29   4.5  
AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA...    29   4.5  

>AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p
           protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 267 IIIYKKCRDSIMSNYYIGSYAAISYFI*KNKTSNIVE--IFC*RPERSRIGALVMYKLFL 94
           I I+ KCRD   S   +  Y  ++YF+   K S ++E  IF  R +++++  L ++  F 
Sbjct: 82  IYIFWKCRDIGSSPELVRRYYNLAYFLFWLKISELIETVIFVLRKKQNQVSKLHIFHHFS 141

Query: 93  NI 88
            +
Sbjct: 142 TV 143


>AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA
           protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 267 IIIYKKCRDSIMSNYYIGSYAAISYFI*KNKTSNIVE--IFC*RPERSRIGALVMYKLFL 94
           I I+ KCRD   S   +  Y  ++YF+   K S ++E  IF  R +++++  L ++  F 
Sbjct: 82  IYIFWKCRDIGSSPELVRRYYNLAYFLFWLKISELIETVIFVLRKKQNQVSKLHIFHHFS 141

Query: 93  NI 88
            +
Sbjct: 142 TV 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,049,344
Number of Sequences: 53049
Number of extensions: 508168
Number of successful extensions: 672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)