Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0077
(424 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 164 8e-40
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 157 1e-37
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 1e-35
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 140 1e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 138 4e-32
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 136 2e-31
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 1e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 120 1e-26
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 2e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 5e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 107 9e-23
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 86 2e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 6e-16
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 83 3e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 79 3e-14
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 78 9e-14
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 77 1e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-13
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 76 3e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 75 8e-13
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 74 1e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 74 1e-12
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 74 1e-12
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 73 2e-12
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 71 1e-11
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 70 2e-11
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 66 4e-10
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 65 5e-10
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 63 3e-09
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 61 8e-09
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 60 2e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 6e-08
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 2e-07
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 55 5e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 54 2e-06
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 1e-05
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 49 5e-05
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 46 4e-04
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 46 4e-04
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 45 7e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 44 0.001
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 42 0.004
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 42 0.005
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 42 0.005
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.028
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 39 0.037
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.037
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 39 0.037
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 39 0.037
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 38 0.064
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 38 0.064
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 38 0.085
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 38 0.085
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 38 0.085
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 36 0.34
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 36 0.34
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 36 0.45
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 35 0.60
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 35 0.60
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 35 0.60
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 35 0.79
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 35 0.79
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 34 1.0
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 33 1.8
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 3.2
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 33 3.2
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 32 4.2
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 32 4.2
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 31 7.4
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 7.4
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 31 7.4
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 31 7.4
UniRef50_Q8EZB6 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 31 7.4
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 31 9.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 164 bits (398), Expect = 8e-40
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
KQTRAGQRTRFKAFVAIGD NGH+GLGVKC KEV
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEV 147
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 157 bits (380), Expect = 1e-37
Identities = 68/94 (72%), Positives = 86/94 (91%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
KQTRAGQRTRFKAFV IGD++GH+GLG+KC KEV
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEV 120
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 1e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGL 400
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 140 bits (339), Expect = 1e-32
Identities = 68/87 (78%), Positives = 72/87 (82%)
Frame = +2
Query: 164 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 343
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 344 RTRFKAFVAIGDNNGHIGLGVKCXKEV 424
TRFKAFV IGD NGH+GL VKC KEV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEV 87
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 138 bits (334), Expect = 4e-32
Identities = 64/93 (68%), Positives = 75/93 (80%)
Frame = +2
Query: 146 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 325
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 326 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
QT AGQR RFKAFV +GD NGHIGLGVK KEV
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEV 137
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 136 bits (328), Expect = 2e-31
Identities = 63/92 (68%), Positives = 75/92 (81%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 328
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 329 TRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
TRAGQRTRFKA V +GD+NGH+GLG+K KEV
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 1e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 323 KQTRAGQRTRFK 358
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 120 bits (289), Expect = 1e-26
Identities = 57/91 (62%), Positives = 74/91 (81%)
Frame = +2
Query: 152 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 331
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 332 RAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
AGQ+TRFKA+V +GD++ HIGLG K KEV
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 2e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 323 KQTRAGQRTRFK 358
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 5e-23
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 203 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 382
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 383 NGHIG 397
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 107 bits (257), Expect = 9e-23
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKE 421
KQTRAGQ+TR KA V +GD GH+G+G K KE
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKE 107
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 86.2 bits (204), Expect = 2e-16
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +2
Query: 191 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 370
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 371 IGDNNGHIGLGVKCXKEV 424
I D N ++ LGV+ KE+
Sbjct: 191 IRDCNDNVSLGVEWPKEL 208
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 6e-16
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +2
Query: 167 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 346
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 347 TRFKAFVAIGDNNGHIGL 400
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 82.6 bits (195), Expect = 3e-15
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKC KEV
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEV 91
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.4 bits (187), Expect = 3e-14
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +2
Query: 167 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 346
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 347 TRFKAFVAIGDNNGHIGLGV 406
+KA GD NGH+ G+
Sbjct: 109 -YYKA----GDYNGHVITGL 123
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 77.8 bits (183), Expect = 9e-14
Identities = 37/94 (39%), Positives = 61/94 (64%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+ ++G+R R++A V +G+ NG++G+G+ KEV
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEV 102
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 77.4 bits (182), Expect = 1e-13
Identities = 38/90 (42%), Positives = 59/90 (65%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 334
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 335 AGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
AG+ +R+K V +G+ +G++ +G K++
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 76.6 bits (180), Expect = 2e-13
Identities = 40/93 (43%), Positives = 58/93 (62%)
Frame = -1
Query: 421 FLXALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW 242
FL AL QT++ V V +G++ LE L+GT L L HDL + ++Q A+EEI+DLE F+
Sbjct: 56 FLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNG 115
Query: 241 *RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 143
R QV+ L+ D + A++ + G NP VFL
Sbjct: 116 QRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 76.2 bits (179), Expect = 3e-13
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 334
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 335 AGQRTRFKAFVAIGDNNGHIGLGVKCXKE 421
+G+R + +G+ NG++G+G KE
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKE 90
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 74.5 bits (175), Expect = 8e-13
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +2
Query: 161 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 340
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 341 QRTRFKAFVAIGDNNGHIG 397
+R +F+ VA+G+ +G++G
Sbjct: 117 RRVKFRCVVAVGNRDGYLG 135
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 74.1 bits (174), Expect = 1e-12
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = +2
Query: 158 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 325
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 326 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 73.7 bits (173), Expect = 1e-12
Identities = 45/87 (51%), Positives = 57/87 (65%)
Frame = +2
Query: 164 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 343
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 344 RTRFKAFVAIGDNNGHIGLGVKCXKEV 424
TRF +F I + GH G+GVKC K+V
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKV 77
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 73.7 bits (173), Expect = 1e-12
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 328
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 329 TRAGQRTRFKAFVAIGDNNGHIGLG 403
T GQ TRFKA VA G+ NG++G+G
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIG 125
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +2
Query: 161 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 340
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 341 QRTRFKAFVAIGDNNGHIG 397
+R +F+ VA+G+ +G IG
Sbjct: 66 RRVKFRCVVAVGNRDGLIG 84
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 70.9 bits (166), Expect = 1e-11
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 328
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 329 TRAGQRTRFKAFVAIGDNNGHIGLG 403
T GQ TRFKA VA G+ NG++G+G
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIG 106
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 70.1 bits (164), Expect = 2e-11
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +2
Query: 203 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 382
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 383 NGHIGLGVKCXKEV 424
N ++ LGV+ KE+
Sbjct: 61 NDNVSLGVERPKEL 74
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 65.7 bits (153), Expect = 4e-10
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Frame = +2
Query: 155 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK--------- 307
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 308 ----IMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
QK+T G +TR++ +GD +GH+G+G+
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGL 100
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 65.3 bits (152), Expect = 5e-10
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +2
Query: 188 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 367
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 368 AIGDNNGHIGLGVKCXKEV 424
+G+++G++GL + KEV
Sbjct: 60 VVGNSDGYVGLAICKGKEV 78
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 62.9 bits (146), Expect = 3e-09
Identities = 38/91 (41%), Positives = 51/91 (56%)
Frame = +2
Query: 152 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 331
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 332 RAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
Q+TRFKA V +G + GH+ LG+K EV
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEV 130
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 61.3 bits (142), Expect = 8e-09
Identities = 42/91 (46%), Positives = 51/91 (56%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 328
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 329 TRAGQRTRFKAFVAIGDNNGHIGLGVKCXKE 421
T R FK FV+I D + H+ L KC K+
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKK 141
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 59.7 bits (138), Expect = 2e-08
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -1
Query: 424 DFLXALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFD 245
+FL L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF D
Sbjct: 136 NFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQVW-QQLVNDLEFLD 194
Query: 244 W*RKQVNALEFVDFSFANKTAEFGDRNP--LFLV 149
W R Q + + D + +++ + G+ NP FLV
Sbjct: 195 WQRVQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 6e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 250
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 2e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 161 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 274
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 55.2 bits (127), Expect = 5e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 320 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
QKQT+ GQ+ R K F GD NGH+GLG+KC KEV
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEV 35
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 53.6 bits (123), Expect = 2e-06
Identities = 41/94 (43%), Positives = 49/94 (52%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 322
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 323 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
QRTR K F + + L V C KEV
Sbjct: 73 -----NQRTRIKVFFFLTIRSPMTTL-VNCSKEV 100
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 1e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 309 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 148
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 48.8 bits (111), Expect = 5e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 278 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
GP ++VL++ + K + G+ F+A VA+GD NG IGLG KEV
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEV 116
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 344 RTRFKAFVAIGDNNGHIGLGVKCXKE 421
+ RFKAFVAIGD+NG +G GVKC KE
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKE 86
Score = 33.5 bits (73), Expect = 1.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 149 DQKEWVPVTKLGRLVREGKI 208
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/65 (30%), Positives = 41/65 (63%)
Frame = +2
Query: 215 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 394
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 395 GLGVK 409
GLGVK
Sbjct: 144 GLGVK 148
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 44.8 bits (101), Expect = 7e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 266 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L V
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 287 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
L + V+ + V K + G+R RF A V +GD NGH+G G +EV
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEV 57
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 281 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
P L ++V+KI + K + G R RF A V +GD G IG KE+
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEI 60
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 41.9 bits (94), Expect = 0.005
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 284 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
+ + V+KI + K T+ G+ RF A V IGD NG +G G+
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGM 88
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+ ++KI V K T+ G++ F+A V IGD NG +G+GV ++V
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDV 71
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 39.5 bits (88), Expect = 0.028
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+++L + K + G+R RF A V +GD NG +G+G+ KEV
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEV 62
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 39.1 bits (87), Expect = 0.037
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+ V+++ V K + G++ F+A V +GD G +G+GV KEV
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEV 229
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.037
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 388 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 212
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 211 VDFSFANKTAEFGDRNPLFLVFL 143
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 39.1 bits (87), Expect = 0.037
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 272 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
F ++V+ I V K T+ G+ RF A V +GD G +GLG EV
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEV 88
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 39.1 bits (87), Expect = 0.037
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+ V+++ V K + G++ +F+A V +GD G++G+G KEV
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEV 192
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 38.3 bits (85), Expect = 0.064
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
+ V++I V K + G++ F+A + +GD NG +G+GV
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGV 105
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 38.3 bits (85), Expect = 0.064
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 278 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
G L D V+ I V K + G+ F A V +GD NG +G+G +EV
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREV 90
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 37.9 bits (84), Expect = 0.085
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 287 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
L ++++ + + K T+ G+ RF A IGD G++G G+
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGL 117
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 37.9 bits (84), Expect = 0.085
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+ V+ I V K + G+R F A V +GD NG +G+G KEV
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEV 87
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 37.9 bits (84), Expect = 0.085
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
+++LKI V K T+ G+ F A+GD G IGLG+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGL 48
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 35.9 bits (79), Expect = 0.34
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 278 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
G L ++++ I V K + G+R F A V +GD G +G G +EV
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREV 104
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 35.9 bits (79), Expect = 0.34
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+++++I K T+ G+ F+ +G+ NG +GLG+ +EV
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREV 60
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.5 bits (78), Expect = 0.45
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
+ V++I V K + G++ F+A V +G+ G +G+GV
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGV 56
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 35.1 bits (77), Expect = 0.60
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 266 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EV
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREV 558
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 35.1 bits (77), Expect = 0.60
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 290 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
+++V+KI V K + G+R F A +GD G +G+G EV
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEV 75
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 35.1 bits (77), Expect = 0.60
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 287 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
L ++++ I V K + G+R F A V +GD NG +G G+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGL 55
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 34.7 bits (76), Expect = 0.79
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 424 DFLXALHTQTNMTVVVANGNKCLET 350
+FL T+TNMT+ V+N NKC ET
Sbjct: 33 NFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 34.7 bits (76), Expect = 0.79
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 287 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
L + ++ + T+ G+R F V +GD GH+G G KEV
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEV 73
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 34.3 bits (75), Expect = 1.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
D+++ I V K + G+R F A V +GD G +G G +EV
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREV 67
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 287 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
L ++V+ I K + G+R F A +GD NG +G+G EV
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEV 116
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 3.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 170 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 12
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 32.7 bits (71), Expect = 3.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 272 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 403
++ L + L + V QT G+ F A V +GD NG +GLG
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLG 182
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.3 bits (70), Expect = 4.2
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -1
Query: 334 TCLFLYR-HDL*NLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 185
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 32.3 bits (70), Expect = 4.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 299 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCXKEV 424
++ + V K + G+R F V IGD G +G G+ EV
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEV 61
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 31.5 bits (68), Expect = 7.4
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 209 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 352
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPR 128
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 7.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 140 RAHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHRLEQR 21
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 31.5 bits (68), Expect = 7.4
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 358 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEIND 260
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 31.5 bits (68), Expect = 7.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 296 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 406
++++I + K + G+ RFK + IG N IG+GV
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGV 170
>UniRef50_Q8EZB6 Cluster: Glycerol-3-phosphate dehydrogenase
[NAD(P)+] (EC 1.1.1.94) (NAD(P)H- dependent
glycerol-3-phosphate dehydrogenase); n=6; Bacteria|Rep:
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC
1.1.1.94) (NAD(P)H- dependent glycerol-3-phosphate
dehydrogenase) - Leptospira interrogans
Length = 335
Score = 31.5 bits (68), Expect = 7.4
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMP 316
KE E VP+ + + G + + I+ LP K + + GPS E+++ +P
Sbjct: 91 KEYLPEKVPIVSASKGIENGTLRLVSEIFESELPEKYHSYLSYLSGPSFAKEIIQKVP 148
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 31.1 bits (67), Expect = 9.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 293 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 403
++++ I V + G+R F A V +GD G +G G
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYG 127
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,201,241
Number of Sequences: 1657284
Number of extensions: 6753573
Number of successful extensions: 20301
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 19146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20142
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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